RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 ABHD17BQ5VST6 288 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 TUBA3EQ6PEY2 450 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 TAOK1Q7L7X3 1001 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 ZNF227Q86WZ6 799 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 CRLF3Q8IUI8 442 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 CHERPQ8IWX8 916 aaKnown RBP12.19□□□□□ -0.46
VRK3-203ENST00000424804 MFSD9Q8NBP5 474 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 ZNF740Q8NDX6 193 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 ABHD11Q8NFV4 315 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 OR5T3Q8NGG3 340 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 M1APQ8TC57 530 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 ADAMTS18Q8TE60 1221 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 SLC13A3Q8WWT9 602 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 RHBDF1Q96CC6 855 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 NXNL1Q96CM4 212 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 SCMH1Q96GD3 660 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 PAFAH2Q99487 392 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 SPNS1Q9H2V7 528 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 NMRAL1Q9HBL8 299 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 SNX15Q9NRS6 342 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 SLC22A7Q9Y694 548 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 KCNE2Q9Y6J6 123 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 ADGRG4Q8IZF6 3080 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 POLQO75417 2590 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 A0A087X1B8 175 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 A0A096LPK6 155 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 EXOC1LA0A1B0GW35 172 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 ASPDHA6ND91 283 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 A8MUI8 341 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 WISP3O95389 354 aaPredicted RBP12.18□□□□□ -0.46
VRK3-203ENST00000424804 CRYABP02511 175 aaKnown RBP12.18□□□□□ -0.46
VRK3-203ENST00000424804 C2P06681 752 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 LTA4HP09960 611 aaKnown RBP12.18□□□□□ -0.46
VRK3-203ENST00000424804 FAM153BP0C7A2 387 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 SLC35G6P0C7Q6 338 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 HNF4AP41235 474 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 SERPINB8P50452 374 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 DLG1Q12959 904 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 BTBD16Q32M84 506 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 FAM153CQ494X1 144 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 MINDY4Q4G0A6 757 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 ZNF766Q5HY98 468 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 ZNF468Q5VIY5 522 aaPredicted RBP12.18□□□□□ -0.46
VRK3-203ENST00000424804 NXPE4Q6UWF7 544 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 SIAH3Q8IW03 269 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 TCAIMQ8N3R3 496 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 CAMKVQ8NCB2 501 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 STAG3L4Q8TBR4 150 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 METTL21AQ8WXB1 218 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 CCT6BQ92526 530 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 TSLPQ969D9 159 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 KIAA1191Q96A73 305 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 ZNF354BQ96LW1 612 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 AIF1LQ9BQI0 150 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 TMEM79Q9BSE2 394 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 AICDAQ9GZX7 198 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 CNOT10Q9H9A5 744 aaKnown RBP12.18□□□□□ -0.46
VRK3-203ENST00000424804 MMP25Q9NPA2 562 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 SEC14L3Q9UDX4 400 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 NAALAD2Q9Y3Q0 740 aa12.18□□□□□ -0.46
VRK3-203ENST00000424804 KLF2Q9Y5W3 355 aaPredicted RBP12.18□□□□□ -0.46
VRK3-203ENST00000424804 TRGV8A0A0C4DH27 118 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 TRBC2A0A5B9 178 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 ZNF860A6NHJ4 632 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 UBXN8O00124 270 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 CCL21O00585 134 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 TAPBPO15533 448 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 H2AFYO75367 372 aaKnown RBP12.17□□□□□ -0.46
VRK3-203ENST00000424804 NEURL1O76050 574 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 SMIM10L1P0DMW3 83 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 AGTR2P50052 363 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 AP2B1P63010 937 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 HYAL2Q12891 473 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 C3AR1Q16581 482 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 ZNF630Q2M218 657 aaPredicted RBP12.17□□□□□ -0.46
VRK3-203ENST00000424804 FAM83EQ2M2I3 478 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 SFT2D3Q587I9 215 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 SPINK14Q6IE38 97 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 SULT1C3Q6IMI6 304 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 PAPD4Q6PIY7 484 aaKnown RBP12.17□□□□□ -0.46
VRK3-203ENST00000424804 Q6ZPB1 254 aaPredicted RBP12.17□□□□□ -0.46
VRK3-203ENST00000424804 MRGPRGQ86SM5 289 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 RELL1Q8IUW5 271 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 MCEMP1Q8IX19 187 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 ELP5Q8TE02 316 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 SLC44A1Q8WWI5 657 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 PEX11GQ96HA9 241 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 SMIM10Q96HG1 83 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 SCYL1Q96KG9 808 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 UBXN10Q96LJ8 280 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 PELI2Q9HAT8 420 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 ANKHQ9HCJ1 492 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 IGSF5Q9NSI5 407 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 DNAJC11Q9NVH1 559 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 ANKRD10Q9NXR5 420 aa12.17□□□□□ -0.46
VRK3-203ENST00000424804 HMX2A2RU54 273 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 MAGEB17A8MXT2 336 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 TRIM49D1C9J1S8 452 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 C4orf51C9J302 202 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 ZNHIT1O43257 154 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms