RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 FOXO6A8MYZ6 492 aa15.21■□□□□ 0.03
DDR1-234ENST00000424544 PHGDHO43175 533 aaKnown RBP15.21■□□□□ 0.03
DDR1-234ENST00000424544 RDH16O75452 317 aa15.21■□□□□ 0.03
DDR1-234ENST00000424544 SEC24DO94855 1032 aaPredicted RBP15.21■□□□□ 0.03
DDR1-234ENST00000424544 F10P00742 488 aa15.21■□□□□ 0.03
DDR1-234ENST00000424544 MST1P26927 711 aa15.21■□□□□ 0.03
DDR1-234ENST00000424544 AHRP35869 848 aa15.21■□□□□ 0.03
DDR1-234ENST00000424544 HYAL2Q12891 473 aa15.21■□□□□ 0.03
DDR1-234ENST00000424544 ZRSR2Q15696 482 aaKnown RBP15.21■□□□□ 0.03
DDR1-234ENST00000424544 MINDY4Q4G0A6 757 aa15.21■□□□□ 0.03
DDR1-234ENST00000424544 TNFAIP8L3Q5GJ75 292 aa15.21■□□□□ 0.03
DDR1-234ENST00000424544 AGBL2Q5U5Z8 902 aa15.21■□□□□ 0.03
DDR1-234ENST00000424544 ABHD17BQ5VST6 288 aa15.21■□□□□ 0.03
DDR1-234ENST00000424544 ZNF787Q6DD87 383 aa15.21■□□□□ 0.03
DDR1-234ENST00000424544 TRABD2AQ86V40 505 aa15.21■□□□□ 0.03
DDR1-234ENST00000424544 NKAPQ8N5F7 415 aaKnown RBP15.21■□□□□ 0.03
DDR1-234ENST00000424544 NT5CQ8TCD5 201 aa15.21■□□□□ 0.03
DDR1-234ENST00000424544 ATL1Q8WXF7 558 aa15.21■□□□□ 0.03
DDR1-234ENST00000424544 NEIL2Q969S2 332 aa15.21■□□□□ 0.03
DDR1-234ENST00000424544 ALKBH8Q96BT7 664 aaKnown RBP15.21■□□□□ 0.03
DDR1-234ENST00000424544 SH3GL2Q99962 352 aa15.21■□□□□ 0.03
DDR1-234ENST00000424544 TRIM54Q9BYV2 358 aa15.21■□□□□ 0.03
DDR1-234ENST00000424544 VPS11Q9H270 941 aa15.21■□□□□ 0.03
DDR1-234ENST00000424544 CLK4Q9HAZ1 481 aaKnown RBP15.21■□□□□ 0.03
DDR1-234ENST00000424544 MMP25Q9NPA2 562 aa15.21■□□□□ 0.03
DDR1-234ENST00000424544 C19orf25Q9UFG5 118 aaPredicted RBP15.21■□□□□ 0.03
DDR1-234ENST00000424544 A0A087X1B8 175 aa15.2■□□□□ 0.02
DDR1-234ENST00000424544 A0A1B0GUH1 482 aa15.2■□□□□ 0.02
DDR1-234ENST00000424544 MAGEB17A8MXT2 336 aa15.2■□□□□ 0.02
DDR1-234ENST00000424544 OR1F1O43749 312 aa15.2■□□□□ 0.02
DDR1-234ENST00000424544 WISP2O76076 250 aa15.2■□□□□ 0.02
DDR1-234ENST00000424544 WISP3O95389 354 aaPredicted RBP15.2■□□□□ 0.02
DDR1-234ENST00000424544 SLC35G6P0C7Q6 338 aa15.2■□□□□ 0.02
DDR1-234ENST00000424544 PYGBP11216 843 aa15.2■□□□□ 0.02
DDR1-234ENST00000424544 ZNF37AP17032 561 aaPredicted RBP15.2■□□□□ 0.02
DDR1-234ENST00000424544 ALOX12P18054 663 aa15.2■□□□□ 0.02
DDR1-234ENST00000424544 MEF2AQ02078 507 aaPredicted RBP15.2■□□□□ 0.02
DDR1-234ENST00000424544 ZNF460Q14592 562 aa15.2■□□□□ 0.02
DDR1-234ENST00000424544 ACER2Q5QJU3 275 aa15.2■□□□□ 0.02
DDR1-234ENST00000424544 ANKRD53Q8N9V6 530 aa15.2■□□□□ 0.02
DDR1-234ENST00000424544 OR5T3Q8NGG3 340 aa15.2■□□□□ 0.02
DDR1-234ENST00000424544 ZCCHC10Q8TBK6 192 aa15.2■□□□□ 0.02
DDR1-234ENST00000424544 UTP15Q8TED0 518 aaKnown RBP15.2■□□□□ 0.02
DDR1-234ENST00000424544 SLC5A11Q8WWX8 675 aa15.2■□□□□ 0.02
DDR1-234ENST00000424544 ZNF354BQ96LW1 612 aa15.2■□□□□ 0.02
DDR1-234ENST00000424544 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.2■□□□□ 0.02
DDR1-234ENST00000424544 SENP1Q9P0U3 644 aa15.2■□□□□ 0.02
DDR1-234ENST00000424544 TEKT2Q9UIF3 430 aa15.2■□□□□ 0.02
DDR1-234ENST00000424544 ZFP69BQ9UJL9 534 aa15.2■□□□□ 0.02
DDR1-234ENST00000424544 CDK2AP1O14519 115 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 CHST10O43529 356 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 PRAMEF2O60811 474 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 FHP07954 510 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 SLC35E2BP0CK96 405 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 COL6A2P12110 1019 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 CDKL1Q00532 357 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 SLC18A2Q05940 514 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 ZNF33BQ06732 778 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 NSDHLQ15738 373 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 EXT1Q16394 746 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 BTBD16Q32M84 506 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 NIPAL1Q6NVV3 410 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 SH2D5Q6ZV89 423 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 TBC1D1Q86TI0 1168 aaPredicted RBP15.19■□□□□ 0.02
DDR1-234ENST00000424544 EXOC3L1Q86VI1 746 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 THOC6Q86W42 341 aaKnown RBP15.19■□□□□ 0.02
DDR1-234ENST00000424544 MDS2Q8NDY4 140 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 ELP5Q8TE02 316 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 CREB3L4Q8TEY5 395 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 ANKRD49Q8WVL7 239 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 ARL8AQ96BM9 186 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 TBC1D20Q96BZ9 403 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 PEX11GQ96HA9 241 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 UBXN10Q96LJ8 280 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 SLC6A16Q9GZN6 736 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 AICDAQ9GZX7 198 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 DCDC2Q9UHG0 476 aa15.19■□□□□ 0.02
DDR1-234ENST00000424544 MYO9AB2RTY4 2548 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 LRBAP50851 2863 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 A8MUI8 341 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 GOLGA8RI6L899 631 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 CDC7O00311 574 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 NDUFS4O43181 175 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 MAN1A2O60476 641 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 RASAL1O95294 804 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 GUCA1CO95843 209 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 B3GALT4O96024 378 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 CRYABP02511 175 aaKnown RBP15.18■□□□□ 0.02
DDR1-234ENST00000424544 CCDC166P0CW27 439 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 KRT4P19013 534 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 CD96P40200 585 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 KCNK10P57789 538 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 REEP5Q00765 189 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 TUBA3CQ13748 450 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 CSHL1Q14406 222 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 ABRAXAS2Q15018 415 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 DEFB134Q4QY38 66 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 SFT2D3Q587I9 215 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 TUBA3EQ6PEY2 450 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 PAPD4Q6PIY7 484 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms