RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 PAMR1Q6UXH9 720 aa15.55■□□□□ 0.08
CHCHD3-202ENST00000423635 C4orf22Q6V702 233 aa15.55■□□□□ 0.08
CHCHD3-202ENST00000423635 ABHD13Q7L211 337 aa15.55■□□□□ 0.08
CHCHD3-202ENST00000423635 PIWIL4Q7Z3Z4 852 aaKnown RBP15.55■□□□□ 0.08
CHCHD3-202ENST00000423635 ACRBPQ8NEB7 543 aa15.55■□□□□ 0.08
CHCHD3-202ENST00000423635 ARMC2Q8NEN0 867 aa15.55■□□□□ 0.08
CHCHD3-202ENST00000423635 CD200R1Q8TD46 325 aa15.55■□□□□ 0.08
CHCHD3-202ENST00000423635 UTP15Q8TED0 518 aaKnown RBP15.55■□□□□ 0.08
CHCHD3-202ENST00000423635 VMP1Q96GC9 406 aa15.55■□□□□ 0.08
CHCHD3-202ENST00000423635 ATG10Q9H0Y0 220 aa15.55■□□□□ 0.08
CHCHD3-202ENST00000423635 B4GALT7Q9UBV7 327 aa15.55■□□□□ 0.08
CHCHD3-202ENST00000423635 ERVK-11Q9UQG0 969 aa15.55■□□□□ 0.08
CHCHD3-202ENST00000423635 PDE10AQ9Y233 779 aa15.55■□□□□ 0.08
CHCHD3-202ENST00000423635 TRBC2A0A5B9 178 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 A8MVJ9 347 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 FAM47E-STBD1D6RA91 191 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 OR1F1O43749 312 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 SUSD5O60279 629 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 ZFAND5O76080 213 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 ATE1O95260 518 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 IPO7O95373 1038 aaKnown RBP15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 FTCDO95954 541 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 RAF1P04049 648 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 INHBBP09529 407 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 ZNF888P0CJ79 500 aaPredicted RBP15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 SMIM10L1P0DMW3 83 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 RNH1P13489 461 aaKnown RBP15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 CCR8P51685 355 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 CDK16Q00536 496 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 NAE1Q13564 534 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 SNX1Q13596 522 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 HYAL4Q2M3T9 481 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 XKR6Q5GH73 641 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 RIPPLY2Q5TAB7 128 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 Q71RC1 249 aaPredicted RBP15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 CPNE9Q8IYJ1 553 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 FAM109AQ8N4B1 249 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 FAM222BQ8WU58 562 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 SMIM10Q96HG1 83 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 PWWP2AQ96N64 755 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 GPR21Q99679 349 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 HAUS8Q9BT25 410 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 TSGA10Q9BZW7 698 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 HPF1Q9NWY4 346 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 ZFP69BQ9UJL9 534 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 MMACHCQ9Y4U1 282 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 LIPGQ9Y5X9 500 aa15.54■□□□□ 0.08
CHCHD3-202ENST00000423635 PRKNO60260 465 aaPredicted RBP15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 MYO1DO94832 1006 aa15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 PAMP19021 973 aa15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 CNR1P21554 472 aa15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 BASP1P80723 227 aaKnown RBP15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 FLYWCH1Q4VC44 716 aa15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 C1orf185Q5T7R7 199 aa15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 IL20RBQ6UXL0 311 aa15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 TAOK1Q7L7X3 1001 aa15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 WDR53Q7Z5U6 358 aaPredicted RBP15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 SLC13A5Q86YT5 568 aaPredicted RBP15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 TMEM251Q8N6I4 163 aa15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 MDFIQ99750 246 aa15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 CCDC68Q9H2F9 335 aa15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 IL1RL2Q9HB29 575 aa15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 PARVBQ9HBI1 364 aa15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 DMRT3Q9NQL9 472 aa15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 MYOTQ9UBF9 498 aa15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 ADAMTS6Q9UKP5 1117 aa15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 ACAD8Q9UKU7 415 aa15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 CBLCQ9ULV8 474 aa15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 COMMD10Q9Y6G5 202 aa15.53■□□□□ 0.08
CHCHD3-202ENST00000423635 FN1P02751 2386 aaKnown RBP15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 CTAGE9A4FU28 777 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 PSMD12O00232 456 aaPredicted RBP15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 OR2J2O76002 312 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 GABRA1P14867 456 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 ADSLP30566 484 aaPredicted RBP15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 AHRP35869 848 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 SCTRP47872 440 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 RGS1Q08116 209 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 HYAL2Q12891 473 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 CTBP1Q13363 440 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 TMEM198Q66K66 360 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 LRRC8EQ6NSJ5 796 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 CLEC9AQ6UXN8 241 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 MBOAT1Q6ZNC8 495 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 C16orf47Q6ZP98 133 aaPredicted RBP15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 GK5Q6ZS86 529 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 PRIMA1Q86XR5 153 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 DENND6AQ8IWF6 608 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 ASB15Q8WXK1 588 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 NCLNQ969V3 563 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 ALKBH8Q96BT7 664 aaKnown RBP15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 SARAFQ96BY9 339 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 SNF8Q96H20 258 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 PDLIM2Q96JY6 352 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 FAM173AQ9BQD7 235 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 CCDC77Q9BR77 488 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 PCDHGB3Q9Y5G1 929 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 CLDN16Q9Y5I7 305 aa15.52■□□□□ 0.08
CHCHD3-202ENST00000423635 JMJD1CQ15652 2540 aa15.52■□□□□ 0.07
CHCHD3-202ENST00000423635 A0A0G2JMM0 328 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms