RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 SLC28A2O43868 658 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 JRKO75564 520 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 MTHFD2P13995 350 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 MDH1P40925 334 aaKnown RBP9.15□□□□□ -0.94
HERC3-204ENST00000422770 CCNG1P51959 295 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 PLA2G16P53816 162 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 BTN3A2P78410 334 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 PHEXP78562 749 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 TGM3Q08188 693 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 CFAP157Q5JU67 520 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 DCAF10Q5QP82 559 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 ADNP2Q6IQ32 1131 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 MED27Q6P2C8 311 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 TRIM40Q6P9F5 258 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 FAM47EQ6ZV65 393 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 GOLGA7Q7Z5G4 137 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 PDSS2Q86YH6 399 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 SLC22A9Q8IVM8 553 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 APLFQ8IW19 511 aaPredicted RBP9.15□□□□□ -0.94
HERC3-204ENST00000422770 ZC3H7AQ8IWR0 971 aaKnown RBP9.15□□□□□ -0.94
HERC3-204ENST00000422770 TRIM42Q8IWZ5 723 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 PARP9Q8IXQ6 854 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 KLHDC8AQ8IYD2 350 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 ZNF843Q8N446 348 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 NT5CQ8TCD5 201 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 PPP4R1Q8TF05 950 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 EHD1Q9H4M9 534 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 KLHL31Q9H511 634 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 IPPKQ9H8X2 491 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 ZNF160Q9HCG1 818 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 ATP13A2Q9NQ11 1180 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 ENAMQ9NRM1 1142 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 GPR83Q9NYM4 423 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 TUBD1Q9UJT1 453 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 TMCO1Q9UM00 188 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 TNPO3Q9Y5L0 923 aaKnown RBP9.15□□□□□ -0.94
HERC3-204ENST00000422770 HS3ST3B1Q9Y662 390 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 SLC22A7Q9Y694 548 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 NBEAQ8NFP9 2946 aa9.15□□□□□ -0.94
HERC3-204ENST00000422770 A0A088AWK7 358 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 NSG1A0A0A6YYJ2 146 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 CCDC189A1A4V9 331 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 VSTM2BA6NLU5 285 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 SAP18O00422 153 aaKnown RBP9.14□□□□□ -0.95
HERC3-204ENST00000422770 SOCS6O14544 535 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 CHST10O43529 356 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 GALR3O60755 368 aaPredicted RBP9.14□□□□□ -0.95
HERC3-204ENST00000422770 TRIM13O60858 407 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 B4GALT2O60909 372 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 LYPLA1O75608 230 aaPredicted RBP9.14□□□□□ -0.95
HERC3-204ENST00000422770 C1QL1O75973 258 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 HSPA4LO95757 839 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 ONECUT2O95948 504 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 SERPINE1P05121 402 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 SERPINA6P08185 405 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 RPS17P08708 135 aaKnown RBP9.14□□□□□ -0.95
HERC3-204ENST00000422770 C8orf89P0DMQ9 161 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 CD22P20273 847 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 ZNF10P21506 573 aaPredicted RBP9.14□□□□□ -0.95
HERC3-204ENST00000422770 HNRNPH1P31943 449 aaKnown RBP9.14□□□□□ -0.95
HERC3-204ENST00000422770 PIK3CGP48736 1102 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 RAP1GDS1P52306 607 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 CPSF6Q16630 551 aaKnown RBP eCLIP9.14□□□□□ -0.95
HERC3-204ENST00000422770 NIPAL1Q6NVV3 410 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 KIRREL2Q6UWL6 708 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 RPS27LQ71UM5 84 aaKnown RBP9.14□□□□□ -0.95
HERC3-204ENST00000422770 ZNF605Q86T29 641 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 GALNT16Q8N428 558 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 ARHGEF39Q8N4T4 335 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 FDCSPQ8NFU4 85 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 UTP15Q8TED0 518 aaKnown RBP9.14□□□□□ -0.95
HERC3-204ENST00000422770 CKAP2Q8WWK9 683 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 UBE2E3Q969T4 207 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 GAL3ST3Q96A11 431 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 CCDC126Q96EE4 140 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 MAGEB18Q96M61 343 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 MESP1Q9BRJ9 268 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 SARGQ9BW04 601 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 GATA5Q9BWX5 397 aaPredicted RBP9.14□□□□□ -0.95
HERC3-204ENST00000422770 SLC6A16Q9GZN6 736 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 PITHD1Q9GZP4 211 aaPredicted RBP9.14□□□□□ -0.95
HERC3-204ENST00000422770 REXO4Q9GZR2 422 aaKnown RBP9.14□□□□□ -0.95
HERC3-204ENST00000422770 FAM107BQ9H098 131 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 NOL11Q9H8H0 719 aaKnown RBP9.14□□□□□ -0.95
HERC3-204ENST00000422770 SEMA4BQ9NPR2 832 aaPredicted RBP9.14□□□□□ -0.95
HERC3-204ENST00000422770 OXSMQ9NWU1 459 aa9.14□□□□□ -0.95
HERC3-204ENST00000422770 MGAQ8IWI9 3026 aa9.13□□□□□ -0.95
HERC3-204ENST00000422770 DOCK10Q96BY6 2186 aa9.13□□□□□ -0.95
HERC3-204ENST00000422770 IGLV3-12A0A075B6K2 115 aa9.13□□□□□ -0.95
HERC3-204ENST00000422770 IGHV3-20A0A0C4DH32 117 aa9.13□□□□□ -0.95
HERC3-204ENST00000422770 OR2W5A6NFC9 320 aa9.13□□□□□ -0.95
HERC3-204ENST00000422770 TCP11X1B4DZS4 312 aa9.13□□□□□ -0.95
HERC3-204ENST00000422770 C4orf51C9J302 202 aa9.13□□□□□ -0.95
HERC3-204ENST00000422770 STX16-NPEPL1H3BU86 382 aa9.13□□□□□ -0.95
HERC3-204ENST00000422770 K7EM74 188 aa9.13□□□□□ -0.95
HERC3-204ENST00000422770 STX16O14662 325 aa9.13□□□□□ -0.95
HERC3-204ENST00000422770 B3GALT2O43825 422 aa9.13□□□□□ -0.95
HERC3-204ENST00000422770 PRAMEF4O60810 478 aa9.13□□□□□ -0.95
HERC3-204ENST00000422770 CLEC3AO75596 197 aa9.13□□□□□ -0.95
HERC3-204ENST00000422770 SEC24DO94855 1032 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms