RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 NT5C3BQ969T7 300 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 SLC35C1Q96A29 364 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 ZNF501Q96CX3 271 aaPredicted RBP4.65□□□□□ -1.67
SFXN1-202ENST00000421887 MPP4Q96JB8 637 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 FAM81BQ96LP2 452 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 CFAP57Q96MR6 1250 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 CD180Q99467 661 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 POLDIP3Q9BY77 421 aaKnown RBP4.65□□□□□ -1.67
SFXN1-202ENST00000421887 LHPPQ9H008 270 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 CATSPERBQ9H7T0 1116 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 SYTL2Q9HCH5 934 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 SLC40A1Q9NP59 571 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 UBE2TQ9NPD8 197 aaPredicted RBP4.65□□□□□ -1.67
SFXN1-202ENST00000421887 GPATCH2LQ9NWQ4 482 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 IFT80Q9P2H3 777 aaPredicted RBP4.65□□□□□ -1.67
SFXN1-202ENST00000421887 KCNN3Q9UGI6 736 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 SH2B3Q9UQQ2 575 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 MEMO1Q9Y316 297 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 TRIM49BA6NDI0 452 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 NPIPB15A6NHN6 443 aaPredicted RBP4.64□□□□□ -1.67
SFXN1-202ENST00000421887 ARHGAP42A6NI28 874 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 IDSB3KWA1 339 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 TRAFD1O14545 582 aaPredicted RBP4.64□□□□□ -1.67
SFXN1-202ENST00000421887 P4HA2O15460 535 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 PRAMEF2O60811 474 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 SKAP2O75563 359 aaPredicted RBP4.64□□□□□ -1.67
SFXN1-202ENST00000421887 KLF7O75840 302 aaPredicted RBP4.64□□□□□ -1.67
SFXN1-202ENST00000421887 AGR2O95994 175 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 TOMM40O96008 361 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 CSTBP04080 98 aaKnown RBP4.64□□□□□ -1.67
SFXN1-202ENST00000421887 CAPN1P07384 714 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 ABOP16442 354 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 ZNF30P17039 623 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 VCLP18206 1134 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 CDH3P22223 829 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 IDSP22304 550 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 UGT1A4P22310 534 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 RORAP35398 523 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 CASP2P42575 452 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 HSPA7P48741 367 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 CLCNKAP51800 687 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 PPP1CAP62136 330 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 FMO1Q01740 532 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 PRKAA1Q13131 559 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 MFAP5Q13361 173 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 RAB39AQ14964 217 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 C3AR1Q16581 482 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 CCDC40Q4G0X9 1142 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 ICE2Q659A1 982 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 LRRC66Q68CR7 880 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 TMEM108Q6UXF1 575 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 CERS6Q6ZMG9 384 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 ENOSF1Q7L5Y1 443 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 OOSP2Q86WS3 158 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 BBS5Q8N3I7 341 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.64□□□□□ -1.67
SFXN1-202ENST00000421887 MSANTD4Q8NCY6 345 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 OR2Y1Q8NGV0 311 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 RP9Q8TA86 221 aaKnown RBP4.64□□□□□ -1.67
SFXN1-202ENST00000421887 CCDC110Q8TBZ0 833 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 BRIX1Q8TDN6 353 aaKnown RBP4.64□□□□□ -1.67
SFXN1-202ENST00000421887 ADAMTS18Q8TE60 1221 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 XAGE5Q8WWM1 108 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 C18orf8Q96DM3 657 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 SCRN2Q96FV2 425 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 COX14Q96I36 57 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 TAAR6Q96RI8 345 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 VRK1Q99986 396 aaPredicted RBP4.64□□□□□ -1.67
SFXN1-202ENST00000421887 TMEM121Q9BTD3 319 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 RIOK2Q9BVS4 552 aaKnown RBP4.64□□□□□ -1.67
SFXN1-202ENST00000421887 AP1M1Q9BXS5 423 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 ABCG8Q9H221 673 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 CARD9Q9H257 536 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 ACP6Q9NPH0 428 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 TMEM184CQ9NVA4 438 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 HRASLS2Q9NWW9 162 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 ABI3Q9P2A4 366 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 ZNF624Q9P2J8 865 aaPredicted RBP4.64□□□□□ -1.67
SFXN1-202ENST00000421887 HEY2Q9UBP5 337 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 CNTN6Q9UQ52 1028 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 DNAJC16Q9Y2G8 782 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 PLEKHA6Q9Y2H5 1048 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 DNHD1Q96M86 4753 aa4.64□□□□□ -1.67
SFXN1-202ENST00000421887 FAM237BA0A1B0GVD1 139 aa4.63□□□□□ -1.67
SFXN1-202ENST00000421887 OR5K3A6NET4 321 aa4.63□□□□□ -1.67
SFXN1-202ENST00000421887 SERINC4A6NH21 518 aa4.63□□□□□ -1.67
SFXN1-202ENST00000421887 OR52A4PA6NMU1 304 aa4.63□□□□□ -1.67
SFXN1-202ENST00000421887 GPR89AB7ZAQ6 455 aa4.63□□□□□ -1.67
SFXN1-202ENST00000421887 FAM72CH0Y354 149 aa4.63□□□□□ -1.67
SFXN1-202ENST00000421887 GOLGA8SH3BPF8 625 aa4.63□□□□□ -1.67
SFXN1-202ENST00000421887 J3KR12 359 aa4.63□□□□□ -1.67
SFXN1-202ENST00000421887 M0R3H8 397 aa4.63□□□□□ -1.67
SFXN1-202ENST00000421887 KMOO15229 486 aa4.63□□□□□ -1.67
SFXN1-202ENST00000421887 ZNF749O43361 778 aa4.63□□□□□ -1.67
SFXN1-202ENST00000421887 PRAMEF11O60813 436 aa4.63□□□□□ -1.67
SFXN1-202ENST00000421887 SOCS5O75159 536 aa4.63□□□□□ -1.67
SFXN1-202ENST00000421887 ALOX12BO75342 701 aa4.63□□□□□ -1.67
SFXN1-202ENST00000421887 SLCO2B1O94956 709 aa4.63□□□□□ -1.67
SFXN1-202ENST00000421887 SLC25A14O95258 325 aaPredicted RBP4.63□□□□□ -1.67
SFXN1-202ENST00000421887 YEATS4O95619 227 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms