RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 ZNF304Q9HCX3 659 aa16.63■□□□□ 0.25
LINC00271-201ENST00000421378 LHX9Q9NQ69 397 aa16.63■□□□□ 0.25
LINC00271-201ENST00000421378 PRDM7Q9NQW5 492 aa16.63■□□□□ 0.25
LINC00271-201ENST00000421378 PADI1Q9ULC6 663 aa16.63■□□□□ 0.25
LINC00271-201ENST00000421378 CEP295Q9C0D2 2601 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 HDAC3O15379 428 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 RAD1O60671 282 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 RDH16O75452 317 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 HIST1H1TP22492 207 aaPredicted RBP16.62■□□□□ 0.25
LINC00271-201ENST00000421378 CERS1P27544 350 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 HK2P52789 917 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 MTTPP55157 894 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 BTKQ06187 659 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 TBL3Q12788 808 aaKnown RBP16.62■□□□□ 0.25
LINC00271-201ENST00000421378 SLC9A5Q14940 896 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 NR6A1Q15406 480 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 SPIN4Q56A73 249 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 XKR7Q5GH72 579 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 ZNF793Q6ZN11 406 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 NUDT13Q86X67 352 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 OR2T11Q8NH01 316 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.62■□□□□ 0.25
LINC00271-201ENST00000421378 COL26A1Q96A83 441 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 PPP1R36Q96LQ0 422 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 SERINC2Q96SA4 455 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 SORBS1Q9BX66 1292 aaKnown RBP16.62■□□□□ 0.25
LINC00271-201ENST00000421378 ZNF717Q9BY31 904 aaPredicted RBP16.62■□□□□ 0.25
LINC00271-201ENST00000421378 NUF2Q9BZD4 464 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 VTI1BQ9UEU0 232 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 CCL27Q9Y4X3 112 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 CELSR3Q9NYQ7 3312 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 SCN3AQ9NY46 2000 aa16.62■□□□□ 0.25
LINC00271-201ENST00000421378 B3GALT2O43825 422 aa16.61■□□□□ 0.25
LINC00271-201ENST00000421378 LIPCP11150 499 aa16.61■□□□□ 0.25
LINC00271-201ENST00000421378 PIM1P11309 404 aaPredicted RBP16.61■□□□□ 0.25
LINC00271-201ENST00000421378 FBLP22087 321 aaKnown RBP16.61■□□□□ 0.25
LINC00271-201ENST00000421378 BSGP35613 385 aa16.61■□□□□ 0.25
LINC00271-201ENST00000421378 GYS2P54840 703 aa16.61■□□□□ 0.25
LINC00271-201ENST00000421378 ACSM2AQ08AH3 577 aa16.61■□□□□ 0.25
LINC00271-201ENST00000421378 ACSM2BQ68CK6 577 aa16.61■□□□□ 0.25
LINC00271-201ENST00000421378 Q6ZSR9 355 aa16.61■□□□□ 0.25
LINC00271-201ENST00000421378 PAGE2Q7Z2X7 111 aa16.61■□□□□ 0.25
LINC00271-201ENST00000421378 COMMD6Q7Z4G1 85 aa16.61■□□□□ 0.25
LINC00271-201ENST00000421378 DTX1Q86Y01 620 aa16.61■□□□□ 0.25
LINC00271-201ENST00000421378 WDR75Q8IWA0 830 aaKnown RBP16.61■□□□□ 0.25
LINC00271-201ENST00000421378 METTL4Q8N3J2 472 aa16.61■□□□□ 0.25
LINC00271-201ENST00000421378 C1orf52Q8N6N3 182 aaKnown RBP16.61■□□□□ 0.25
LINC00271-201ENST00000421378 AMER3Q8N944 861 aa16.61■□□□□ 0.25
LINC00271-201ENST00000421378 ACOT4Q8N9L9 421 aa16.61■□□□□ 0.25
LINC00271-201ENST00000421378 GATA6Q92908 595 aa16.61■□□□□ 0.25
LINC00271-201ENST00000421378 QRFPRQ96P65 431 aa16.61■□□□□ 0.25
LINC00271-201ENST00000421378 CHST8Q9H2A9 424 aa16.61■□□□□ 0.25
LINC00271-201ENST00000421378 AKIRIN1Q9H9L7 192 aaPredicted RBP16.61■□□□□ 0.25
LINC00271-201ENST00000421378 RIC8BQ9NVN3 520 aa16.61■□□□□ 0.25
LINC00271-201ENST00000421378 IFT80Q9P2H3 777 aaPredicted RBP16.61■□□□□ 0.25
LINC00271-201ENST00000421378 MAP4K5Q9Y4K4 846 aa16.61■□□□□ 0.25
LINC00271-201ENST00000421378 SEC16AO15027 2179 aa16.61■□□□□ 0.25
LINC00271-201ENST00000421378 FRYQ5TBA9 3013 aa16.61■□□□□ 0.25
LINC00271-201ENST00000421378 AHCTF1Q8WYP5 2266 aa16.61■□□□□ 0.25
LINC00271-201ENST00000421378 ATP6AP2A0A1C7CYW4 349 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 TRPC5OSA6NMA1 111 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 C9J4A7 227 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 NPIPB8E9PQR5 432 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 POLR3GO15318 223 aaPredicted RBP16.6■□□□□ 0.25
LINC00271-201ENST00000421378 EDF1O60869 148 aaKnown RBP16.6■□□□□ 0.25
LINC00271-201ENST00000421378 ATP6AP2O75787 350 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 SCELO95171 688 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 PRPH2P23942 346 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 ATP5A1P25705 553 aaKnown RBP16.6■□□□□ 0.25
LINC00271-201ENST00000421378 PCBP4P57723 403 aaKnown RBP16.6■□□□□ 0.25
LINC00271-201ENST00000421378 OLR1P78380 273 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 MAT1AQ00266 395 aaKnown RBP16.6■□□□□ 0.25
LINC00271-201ENST00000421378 LCN10Q6JVE6 187 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 FAM199XQ6PEV8 388 aaPredicted RBP16.6■□□□□ 0.25
LINC00271-201ENST00000421378 CACNA2D3Q8IZS8 1091 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 OR5T3Q8NGG3 340 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 FGF11Q92914 225 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 APIPQ96GX9 242 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 C3orf30Q96M34 536 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 DDX31Q9H8H2 851 aaKnown RBP16.6■□□□□ 0.25
LINC00271-201ENST00000421378 MEAF6Q9HAF1 191 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 SLC22A11Q9NSA0 550 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 HCN3Q9P1Z3 774 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 TRPC4Q9UBN4 977 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 DKK4Q9UBT3 224 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 ARHGAP10A1A4S6 786 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 LSM1O15116 133 aaKnown RBP16.6■□□□□ 0.25
LINC00271-201ENST00000421378 EEDO75530 441 aaKnown RBP16.6■□□□□ 0.25
LINC00271-201ENST00000421378 ONECUT2O95948 504 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 VIMP08670 466 aaKnown RBP16.6■□□□□ 0.25
LINC00271-201ENST00000421378 STAT5AP42229 794 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 SYT16Q17RD7 645 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 GALNTL6Q49A17 601 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 ATP6AP1LQ52LC2 224 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 FAM198BQ6UWH4 519 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 COX15Q7KZN9 410 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 ZCCHC7Q8N3Z6 543 aaKnown RBP16.6■□□□□ 0.25
LINC00271-201ENST00000421378 IL22RA1Q8N6P7 574 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 CHTF18Q8WVB6 975 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 NKD1Q969G9 470 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms