RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 A0A0J9YVX5 310 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 A0A1W2PQM1 296 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 ERICH4A6NGS2 130 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 CFLARO15519 480 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 CBFA2T3O75081 653 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 DNAJC8O75937 253 aaPredicted RBP13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 KLK1P06870 262 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 KRT16P08779 473 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 DRD2P14416 443 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 PVRP15151 417 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 ATP5A1P25705 553 aaKnown RBP13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 CYP4F2P78329 520 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 FOXM1Q08050 763 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 FAM53BQ14153 422 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 HEPACAMQ14CZ8 416 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 TLR1Q15399 786 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 DNAL1Q4LDG9 190 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 PERM1Q5SV97 790 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 NKAIN2Q5VXU1 208 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 FRMPD2BQ6IN97 320 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 C8orf82Q6P1X6 216 aaPredicted RBP13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 MED25Q71SY5 747 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 PCYOX1LQ8NBM8 494 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 OR9I1Q8NGQ6 314 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 IFI44Q8TCB0 444 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 C16orf78Q8WTQ4 265 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 TEFMQ96QE5 360 aaKnown RBP13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 PRPF18Q99633 342 aaKnown RBP13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 NPLQ9BXD5 320 aaPredicted RBP13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 G3BP2Q9UN86 482 aaKnown RBP13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 BTBD3Q9Y2F9 522 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 GMEB1Q9Y692 573 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 HEATR5BQ9P2D3 2071 aa13.56□□□□□ -0.24
SHMT1P1-201ENST00000419974 LOC105369274A0A096LPK9 316 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 LOC102723532A0A0G2JNH3 316 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 LOC100653049A0A140TA62 436 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 B2RBV5 119 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 FBP2O00757 339 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 KIF1CO43896 1103 aaKnown RBP13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 KRT34O76011 436 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 PGRP06401 933 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 CEACAM1P13688 526 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 CAPN3P20807 821 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 GCGRP47871 477 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 MTTPP55157 894 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 HNRNPH2P55795 449 aaKnown RBP13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 SKP1P63208 163 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 CYP4F3Q08477 520 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 SLC9A5Q14940 896 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 SPATS1Q496A3 300 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 TOR1AIP1Q5JTV8 583 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 CCNYL2Q5T2Q4 361 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 YOD1Q5VVQ6 348 aaPredicted RBP13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 ZNF574Q6ZN55 896 aaPredicted RBP13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 FAM92BQ6ZTR7 304 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 BPHLQ86WA6 291 aaPredicted RBP13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 OR4N4Q8N0Y3 316 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 ARHGAP24Q8N264 748 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 CSNK1A1LQ8N752 337 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 TM4SF18Q96CE8 201 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 CNDP2Q96KP4 475 aaKnown RBP13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 EGLN2Q96KS0 407 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 FCRL4Q96PJ5 515 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 SERINC2Q96SA4 455 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 CDC6Q99741 560 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 KLHL31Q9H511 634 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 REEP4Q9H6H4 257 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 LYRM4Q9HD34 91 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 LYARQ9NX58 379 aaKnown RBP13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 MS4A12Q9NXJ0 267 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 BAIAP2L1Q9UHR4 511 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 LEF1Q9UJU2 399 aaPredicted RBP13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 EXO1Q9UQ84 846 aaKnown RBP13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 MAN2B2Q9Y2E5 1009 aa13.55□□□□□ -0.24
SHMT1P1-201ENST00000419974 GNG14A0A1W2PPG7 69 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 ARHGAP10A1A4S6 786 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 CPED1A4D0V7 1026 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 CFAP73A6NFT4 308 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 CCDC154A6NI56 674 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 SCAMP2O15127 329 aaKnown RBP13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 ERI3O43414 337 aaKnown RBP13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 SCN2BO60939 215 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 FURINP09958 794 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 CDK4P11802 303 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 CD1EP15812 388 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 ALOX12P18054 663 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 DDCP20711 480 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 HPCAL1P37235 193 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 MLLT3P42568 568 aaPredicted RBP13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 MAPK12P53778 367 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 CCL7P80098 99 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 DAB2P98082 770 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 ZFP36L1Q07352 338 aaKnown RBP13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 KLC1Q07866 573 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 UGT8Q16880 541 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 TMTC4Q5T4D3 741 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 ZNF793Q6ZN11 406 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 GK5Q6ZS86 529 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 GLRX5Q86SX6 157 aa13.54□□□□□ -0.24
SHMT1P1-201ENST00000419974 SLITRK4Q8IW52 837 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms