RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ZNF354BQ96LW1 612 aa15.48■□□□□ 0.07
LINC00404-201ENST00000418660 PTCHD1Q96NR3 888 aa15.48■□□□□ 0.07
LINC00404-201ENST00000418660 KCNK13Q9HB14 408 aa15.48■□□□□ 0.07
LINC00404-201ENST00000418660 MMP25Q9NPA2 562 aa15.48■□□□□ 0.07
LINC00404-201ENST00000418660 PRDM9Q9NQV7 894 aa15.48■□□□□ 0.07
LINC00404-201ENST00000418660 STMN3Q9NZ72 180 aa15.48■□□□□ 0.07
LINC00404-201ENST00000418660 ASB1Q9Y576 335 aa15.48■□□□□ 0.07
LINC00404-201ENST00000418660 FLNCQ14315 2725 aa15.48■□□□□ 0.07
LINC00404-201ENST00000418660 A0A088AWK7 358 aa15.47■□□□□ 0.07
LINC00404-201ENST00000418660 A0A096LPK6 155 aa15.47■□□□□ 0.07
LINC00404-201ENST00000418660 TRAV17A0A0B4J275 112 aa15.47■□□□□ 0.07
LINC00404-201ENST00000418660 FAM227AF5H4B4 570 aa15.47■□□□□ 0.07
LINC00404-201ENST00000418660 K7EPI3 171 aa15.47■□□□□ 0.07
LINC00404-201ENST00000418660 ERI3O43414 337 aaKnown RBP15.47■□□□□ 0.07
LINC00404-201ENST00000418660 TBX6O95947 436 aaPredicted RBP15.47■□□□□ 0.07
LINC00404-201ENST00000418660 MTHFD2P13995 350 aa15.47■□□□□ 0.07
LINC00404-201ENST00000418660 CD22P20273 847 aa15.47■□□□□ 0.07
LINC00404-201ENST00000418660 ZNF10P21506 573 aaPredicted RBP15.47■□□□□ 0.07
LINC00404-201ENST00000418660 TYK2P29597 1187 aa15.47■□□□□ 0.07
LINC00404-201ENST00000418660 ECHS1P30084 290 aa15.47■□□□□ 0.07
LINC00404-201ENST00000418660 BTG2P78543 158 aa15.47■□□□□ 0.07
LINC00404-201ENST00000418660 ZNF33BQ06732 778 aa15.47■□□□□ 0.07
LINC00404-201ENST00000418660 PCDH1Q08174 1060 aa15.47■□□□□ 0.07
LINC00404-201ENST00000418660 ACAP2Q15057 778 aa15.47■□□□□ 0.07
LINC00404-201ENST00000418660 TRIM40Q6P9F5 258 aa15.47■□□□□ 0.07
LINC00404-201ENST00000418660 OR2L5Q8NG80 312 aa15.47■□□□□ 0.07
LINC00404-201ENST00000418660 QRFPRQ96P65 431 aa15.47■□□□□ 0.07
LINC00404-201ENST00000418660 REXO4Q9GZR2 422 aaKnown RBP15.47■□□□□ 0.07
LINC00404-201ENST00000418660 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.47■□□□□ 0.07
LINC00404-201ENST00000418660 OPTCQ9UBM4 332 aa15.47■□□□□ 0.07
LINC00404-201ENST00000418660 SETXQ7Z333 2677 aaKnown RBP15.46■□□□□ 0.07
LINC00404-201ENST00000418660 IGKV3D-11A0A0A0MRZ8 115 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 A0A0G2JN53 185 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 OR5H15A6NDH6 313 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 ANKUB1A6NFN9 424 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 B3GALT2O43825 422 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 AGFG2O95081 481 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 KLHL2O95198 593 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 ACSL3O95573 720 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 F10P00742 488 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 ALDOAP04075 364 aaKnown RBP15.46■□□□□ 0.07
LINC00404-201ENST00000418660 INHBAP08476 426 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 MYBL2P10244 700 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 SERPINB8P50452 374 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 SLC26A5P58743 744 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 RUNX2Q13950 521 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 ADNP2Q6IQ32 1131 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 KLC3Q6P597 504 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 CEP112Q8N8E3 955 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 ARMC2Q8NEN0 867 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 PRR7Q8TB68 274 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 FAR1Q8WVX9 515 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 SLC44A1Q8WWI5 657 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 UBE2E3Q969T4 207 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 MAGEB10Q96LZ2 347 aaPredicted RBP15.46■□□□□ 0.07
LINC00404-201ENST00000418660 SERINC2Q96SA4 455 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 MMACHCQ9Y4U1 282 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 RELNP78509 3460 aa15.46■□□□□ 0.07
LINC00404-201ENST00000418660 TCRBV16S1A1N1A0A5B0 115 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 EPB42P16452 691 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 MAOAP21397 527 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 SERPINB9P50453 376 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 PLA2G16P53816 162 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 TGM3Q08188 693 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 ELOAQ14241 798 aaKnown RBP15.45■□□□□ 0.06
LINC00404-201ENST00000418660 NAA30Q147X3 362 aaPredicted RBP15.45■□□□□ 0.06
LINC00404-201ENST00000418660 SETDB1Q15047 1291 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 INAQ16352 499 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 MEP1AQ16819 746 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 ACER2Q5QJU3 275 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 FCRLBQ6BAA4 426 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 MED27Q6P2C8 311 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 ABHD17CQ6PCB6 329 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 FAM180AQ6UWF9 173 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 LAS2Q8IYD9 372 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 CYP4X1Q8N118 509 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 SLC5A8Q8N695 610 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 ST6GALNAC3Q8NDV1 305 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 SUN3Q8TAQ9 357 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 ADAMTS18Q8TE60 1221 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 GPR78Q96P69 363 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 VPS11Q9H270 941 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 NECTIN3Q9NQS3 549 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 ABI3Q9P2A4 366 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 IKBKGQ9Y6K9 419 aa15.45■□□□□ 0.06
LINC00404-201ENST00000418660 CLDN4O14493 209 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 KLK8O60259 260 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 SEMA7AO75326 666 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 GFAPP14136 432 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 EDN3P14138 238 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 SERPINB1P30740 379 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 MSH2P43246 934 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 ALDH18A1P54886 795 aaKnown RBP15.44■□□□□ 0.06
LINC00404-201ENST00000418660 MTTPP55157 894 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 RAB38P57729 211 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 TAS2R50P59544 299 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 PFKFB4Q16877 469 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 TAOK1Q7L7X3 1001 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 CRLF3Q8IUI8 442 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 LGI4Q8N135 537 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms