RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 ESRRAP11474 423 aaPredicted RBP16.95■□□□□ 0.3
VCP-202ENST00000417448 MTHFD2P13995 350 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 SLC26A3P40879 764 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 SLC6A12P48065 614 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 ABATP80404 500 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 RBPJQ06330 500 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 ACAP2Q15057 778 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 HKDC1Q2TB90 917 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 TECRLQ5HYJ1 363 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 ZC3H12BQ5HYM0 836 aaKnown RBP16.95■□□□□ 0.3
VCP-202ENST00000417448 LGSNQ5TDP6 509 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 RNF44Q7L0R7 432 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 SIRT6Q8N6T7 355 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 AMER2Q8N7J2 671 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 SNX31Q8N9S9 440 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 DNAJB8Q8NHS0 232 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 TMEM184CQ9NVA4 438 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 PTBP2Q9UKA9 531 aaKnown RBP16.95■□□□□ 0.3
VCP-202ENST00000417448 DYRK1BQ9Y463 629 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 KLK4Q9Y5K2 254 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 FLNAP21333 2647 aaKnown RBP16.95■□□□□ 0.3
VCP-202ENST00000417448 MAP2K7O14733 419 aa16.94■□□□□ 0.3
VCP-202ENST00000417448 PRAMEF4O60810 478 aa16.94■□□□□ 0.3
VCP-202ENST00000417448 CRYABP02511 175 aaKnown RBP16.94■□□□□ 0.3
VCP-202ENST00000417448 CELA2AP08217 269 aa16.94■□□□□ 0.3
VCP-202ENST00000417448 PRR35P0CG20 571 aa16.94■□□□□ 0.3
VCP-202ENST00000417448 CCND1P24385 295 aa16.94■□□□□ 0.3
VCP-202ENST00000417448 OR1D4P47884 311 aa16.94■□□□□ 0.3
VCP-202ENST00000417448 PFKFB4Q16877 469 aa16.94■□□□□ 0.3
VCP-202ENST00000417448 PRAMEF9Q5VWM5 478 aa16.94■□□□□ 0.3
VCP-202ENST00000417448 SULT1C3Q6IMI6 304 aa16.94■□□□□ 0.3
VCP-202ENST00000417448 MEX3BQ6ZN04 569 aaKnown RBP16.94■□□□□ 0.3
VCP-202ENST00000417448 TIFABQ6ZNK6 161 aa16.94■□□□□ 0.3
VCP-202ENST00000417448 KBTBD2Q8IY47 623 aa16.94■□□□□ 0.3
VCP-202ENST00000417448 PDPRQ8NCN5 879 aa16.94■□□□□ 0.3
VCP-202ENST00000417448 SLC5A11Q8WWX8 675 aa16.94■□□□□ 0.3
VCP-202ENST00000417448 ZFYVE21Q9BQ24 234 aa16.94■□□□□ 0.3
VCP-202ENST00000417448 HAUS8Q9BT25 410 aa16.94■□□□□ 0.3
VCP-202ENST00000417448 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.94■□□□□ 0.3
VCP-202ENST00000417448 PCBD2Q9H0N5 130 aa16.94■□□□□ 0.3
VCP-202ENST00000417448 C12orf65Q9H3J6 166 aaKnown RBP16.94■□□□□ 0.3
VCP-202ENST00000417448 NUDT4Q9NZJ9 180 aa16.94■□□□□ 0.3
VCP-202ENST00000417448 TMEM216Q9P0N5 145 aa16.94■□□□□ 0.3
VCP-202ENST00000417448 HCFC1P51610 2035 aa16.94■□□□□ 0.3
VCP-202ENST00000417448 DSCR3O14972 297 aa16.93■□□□□ 0.3
VCP-202ENST00000417448 STK16O75716 305 aa16.93■□□□□ 0.3
VCP-202ENST00000417448 SBK3P0C264 359 aa16.93■□□□□ 0.3
VCP-202ENST00000417448 GFAPP14136 432 aa16.93■□□□□ 0.3
VCP-202ENST00000417448 ACPPP15309 386 aa16.93■□□□□ 0.3
VCP-202ENST00000417448 BCL6P41182 706 aa16.93■□□□□ 0.3
VCP-202ENST00000417448 HNMTP50135 292 aa16.93■□□□□ 0.3
VCP-202ENST00000417448 ARSFP54793 590 aa16.93■□□□□ 0.3
VCP-202ENST00000417448 CASP6P55212 293 aa16.93■□□□□ 0.3
VCP-202ENST00000417448 KLC3Q6P597 504 aa16.93■□□□□ 0.3
VCP-202ENST00000417448 TMPRSS11BQ86T26 416 aa16.93■□□□□ 0.3
VCP-202ENST00000417448 MTBPQ96DY7 904 aa16.93■□□□□ 0.3
VCP-202ENST00000417448 OR2A5Q96R48 311 aa16.93■□□□□ 0.3
VCP-202ENST00000417448 CRB3Q9BUF7 120 aa16.93■□□□□ 0.3
VCP-202ENST00000417448 CD244Q9BZW8 370 aa16.93■□□□□ 0.3
VCP-202ENST00000417448 CUTCQ9NTM9 273 aa16.93■□□□□ 0.3
VCP-202ENST00000417448 DNAJC11Q9NVH1 559 aa16.93■□□□□ 0.3
VCP-202ENST00000417448 XPR1Q9UBH6 696 aa16.93■□□□□ 0.3
VCP-202ENST00000417448 FETUBQ9UGM5 382 aa16.93■□□□□ 0.3
VCP-202ENST00000417448 NXT1Q9UKK6 140 aaKnown RBP16.93■□□□□ 0.3
VCP-202ENST00000417448 ZNF835Q9Y2P0 537 aa16.93■□□□□ 0.3
VCP-202ENST00000417448 MEMO1Q9Y316 297 aa16.93■□□□□ 0.3
VCP-202ENST00000417448 MRPS2Q9Y399 296 aaKnown RBP16.93■□□□□ 0.3
VCP-202ENST00000417448 OR1F1O43749 312 aa16.92■□□□□ 0.3
VCP-202ENST00000417448 SIX3O95343 332 aaPredicted RBP16.92■□□□□ 0.3
VCP-202ENST00000417448 WDPCPO95876 746 aa16.92■□□□□ 0.3
VCP-202ENST00000417448 PIM1P11309 404 aaPredicted RBP16.92■□□□□ 0.3
VCP-202ENST00000417448 COX6A1P12074 109 aa16.92■□□□□ 0.3
VCP-202ENST00000417448 KRT15P19012 456 aa16.92■□□□□ 0.3
VCP-202ENST00000417448 GGT5P36269 586 aa16.92■□□□□ 0.3
VCP-202ENST00000417448 CCR8P51685 355 aa16.92■□□□□ 0.3
VCP-202ENST00000417448 KLC1Q07866 573 aa16.92■□□□□ 0.3
VCP-202ENST00000417448 IFFO1Q0D2I5 559 aa16.92■□□□□ 0.3
VCP-202ENST00000417448 FAM219BQ5XKK7 198 aa16.92■□□□□ 0.3
VCP-202ENST00000417448 ATG9BQ674R7 924 aa16.92■□□□□ 0.3
VCP-202ENST00000417448 NXPE4Q6UWF7 544 aa16.92■□□□□ 0.3
VCP-202ENST00000417448 RPS27LQ71UM5 84 aaKnown RBP16.92■□□□□ 0.3
VCP-202ENST00000417448 VN1R4Q7Z5H5 301 aa16.92■□□□□ 0.3
VCP-202ENST00000417448 SHISA5Q8N114 240 aa16.92■□□□□ 0.3
VCP-202ENST00000417448 CSNK1A1LQ8N752 337 aa16.92■□□□□ 0.3
VCP-202ENST00000417448 RHEBL1Q8TAI7 183 aa16.92■□□□□ 0.3
VCP-202ENST00000417448 PHF21BQ96EK2 531 aa16.92■□□□□ 0.3
VCP-202ENST00000417448 ZNF285Q96NJ3 590 aa16.92■□□□□ 0.3
VCP-202ENST00000417448 RUVBL1Q9Y265 456 aaKnown RBP16.92■□□□□ 0.3
VCP-202ENST00000417448 PCDHGB6Q9Y5F9 930 aa16.92■□□□□ 0.3
VCP-202ENST00000417448 MAU2Q9Y6X3 613 aa16.92■□□□□ 0.3
VCP-202ENST00000417448 INTS1Q8N201 2190 aaKnown RBP16.92■□□□□ 0.3
VCP-202ENST00000417448 AKAP6Q13023 2319 aa16.92■□□□□ 0.3
VCP-202ENST00000417448 ABCA4P78363 2273 aa16.91■□□□□ 0.3
VCP-202ENST00000417448 HYKKA2RU49 373 aa16.91■□□□□ 0.3
VCP-202ENST00000417448 SERPIND1P05546 499 aa16.91■□□□□ 0.3
VCP-202ENST00000417448 EZRP15311 586 aaKnown RBP16.91■□□□□ 0.3
VCP-202ENST00000417448 EPORP19235 508 aa16.91■□□□□ 0.3
VCP-202ENST00000417448 Q6ZPB1 254 aaPredicted RBP16.91■□□□□ 0.3
VCP-202ENST00000417448 SLCO4C1Q6ZQN7 724 aa16.91■□□□□ 0.3
VCP-202ENST00000417448 CCDC91Q7Z6B0 441 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms