RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 C18orf21Q32NC0 220 aaPredicted RBP23.75■■□□□ 1.39
VEGFA-208ENST00000417285 KRTCAP3Q53RY4 240 aa23.75■■□□□ 1.39
VEGFA-208ENST00000417285 C1QL3Q5VWW1 255 aa23.75■■□□□ 1.39
VEGFA-208ENST00000417285 MTFR2Q6P444 385 aa23.75■■□□□ 1.39
VEGFA-208ENST00000417285 PPM1NQ8N819 430 aa23.75■■□□□ 1.39
VEGFA-208ENST00000417285 GAL3ST3Q96A11 431 aa23.75■■□□□ 1.39
VEGFA-208ENST00000417285 SIGLEC12Q96PQ1 595 aa23.75■■□□□ 1.39
VEGFA-208ENST00000417285 NPLQ9BXD5 320 aaPredicted RBP23.75■■□□□ 1.39
VEGFA-208ENST00000417285 EHD1Q9H4M9 534 aa23.75■■□□□ 1.39
VEGFA-208ENST00000417285 CDCP1Q9H5V8 836 aa23.75■■□□□ 1.39
VEGFA-208ENST00000417285 COPG2Q9UBF2 871 aa23.75■■□□□ 1.39
VEGFA-208ENST00000417285 CPAMD8Q8IZJ3 1885 aa23.75■■□□□ 1.39
VEGFA-208ENST00000417285 CREBBPQ92793 2442 aa23.74■■□□□ 1.39
VEGFA-208ENST00000417285 A0A088AWK7 358 aa23.74■■□□□ 1.39
VEGFA-208ENST00000417285 TCRBV16S1A1N1A0A5B0 115 aa23.74■■□□□ 1.39
VEGFA-208ENST00000417285 CTAGE15A4D2H0 777 aa23.74■■□□□ 1.39
VEGFA-208ENST00000417285 GABRR3A8MPY1 467 aa23.74■■□□□ 1.39
VEGFA-208ENST00000417285 ZNF10P21506 573 aaPredicted RBP23.74■■□□□ 1.39
VEGFA-208ENST00000417285 BTN3A2P78410 334 aa23.74■■□□□ 1.39
VEGFA-208ENST00000417285 OC90Q02509 493 aaPredicted RBP23.74■■□□□ 1.39
VEGFA-208ENST00000417285 TRADDQ15628 312 aa23.74■■□□□ 1.39
VEGFA-208ENST00000417285 SPINK14Q6IE38 97 aa23.74■■□□□ 1.39
VEGFA-208ENST00000417285 SULT1C3Q6IMI6 304 aa23.74■■□□□ 1.39
VEGFA-208ENST00000417285 C8orf74Q6P047 294 aa23.74■■□□□ 1.39
VEGFA-208ENST00000417285 CTAGE6Q86UF2 777 aa23.74■■□□□ 1.39
VEGFA-208ENST00000417285 FBF1Q8TES7 1133 aa23.74■■□□□ 1.39
VEGFA-208ENST00000417285 SCMH1Q96GD3 660 aa23.74■■□□□ 1.39
VEGFA-208ENST00000417285 UBXN10Q96LJ8 280 aa23.74■■□□□ 1.39
VEGFA-208ENST00000417285 RHBGQ9H310 441 aa23.74■■□□□ 1.39
VEGFA-208ENST00000417285 DNAJC11Q9NVH1 559 aa23.74■■□□□ 1.39
VEGFA-208ENST00000417285 SUCOQ9UBS9 1254 aaKnown RBP23.74■■□□□ 1.39
VEGFA-208ENST00000417285 MMACHCQ9Y4U1 282 aa23.74■■□□□ 1.39
VEGFA-208ENST00000417285 IGKV3D-11A0A0A0MRZ8 115 aa23.73■■□□□ 1.39
VEGFA-208ENST00000417285 LRIT2A6NDA9 550 aa23.73■■□□□ 1.39
VEGFA-208ENST00000417285 S100BP04271 92 aaPredicted RBP23.73■■□□□ 1.39
VEGFA-208ENST00000417285 SLBPQ14493 270 aaKnown RBP eCLIP23.73■■□□□ 1.39
VEGFA-208ENST00000417285 SLMAPQ14BN4 828 aa23.73■■□□□ 1.39
VEGFA-208ENST00000417285 OR4D1Q15615 310 aa23.73■■□□□ 1.39
VEGFA-208ENST00000417285 SLC25A25Q6KCM7 469 aa23.73■■□□□ 1.39
VEGFA-208ENST00000417285 RAPH1Q70E73 1250 aa23.73■■□□□ 1.39
VEGFA-208ENST00000417285 CA13Q8N1Q1 262 aa23.73■■□□□ 1.39
VEGFA-208ENST00000417285 KIAA1191Q96A73 305 aa23.73■■□□□ 1.39
VEGFA-208ENST00000417285 TMEM79Q9BSE2 394 aa23.73■■□□□ 1.39
VEGFA-208ENST00000417285 ANKRD10Q9NXR5 420 aa23.73■■□□□ 1.39
VEGFA-208ENST00000417285 CD274Q9NZQ7 290 aa23.73■■□□□ 1.39
VEGFA-208ENST00000417285 RNF112Q9ULX5 631 aa23.73■■□□□ 1.39
VEGFA-208ENST00000417285 TRGV8A0A0C4DH27 118 aa23.72■■□□□ 1.39
VEGFA-208ENST00000417285 ANKDD1BA6NHY2 528 aa23.72■■□□□ 1.39
VEGFA-208ENST00000417285 SAGE2PA6NJ88 616 aa23.72■■□□□ 1.39
VEGFA-208ENST00000417285 FAM227AF5H4B4 570 aa23.72■■□□□ 1.39
VEGFA-208ENST00000417285 CLDN4O14493 209 aa23.72■■□□□ 1.39
VEGFA-208ENST00000417285 CLGNO14967 610 aa23.72■■□□□ 1.39
VEGFA-208ENST00000417285 TAPBPO15533 448 aa23.72■■□□□ 1.39
VEGFA-208ENST00000417285 CLEC3AO75596 197 aa23.72■■□□□ 1.39
VEGFA-208ENST00000417285 SP1P08047 785 aa23.72■■□□□ 1.39
VEGFA-208ENST00000417285 MAOAP21397 527 aa23.72■■□□□ 1.39
VEGFA-208ENST00000417285 CASP6P55212 293 aa23.72■■□□□ 1.39
VEGFA-208ENST00000417285 SLC7A5Q01650 507 aa23.72■■□□□ 1.39
VEGFA-208ENST00000417285 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.72■■□□□ 1.391e-6■■■■■ 40.2
VEGFA-208ENST00000417285 FAM98AQ8NCA5 519 aaKnown RBP23.72■■□□□ 1.39
VEGFA-208ENST00000417285 PDPRQ8NCN5 879 aa23.72■■□□□ 1.39
VEGFA-208ENST00000417285 THAP3Q8WTV1 239 aaPredicted RBP23.72■■□□□ 1.39
VEGFA-208ENST00000417285 MS4A6EQ96DS6 147 aa23.72■■□□□ 1.39
VEGFA-208ENST00000417285 KLHL1Q9NR64 748 aa23.72■■□□□ 1.39
VEGFA-208ENST00000417285 LRFN1Q9P244 771 aa23.72■■□□□ 1.39
VEGFA-208ENST00000417285 ASPDHA6ND91 283 aa23.71■■□□□ 1.39
VEGFA-208ENST00000417285 MAN1A2O60476 641 aa23.71■■□□□ 1.39
VEGFA-208ENST00000417285 STK16O75716 305 aa23.71■■□□□ 1.39
VEGFA-208ENST00000417285 FAM155BO75949 473 aa23.71■■□□□ 1.39
VEGFA-208ENST00000417285 CRABP2P29373 138 aa23.71■■□□□ 1.39
VEGFA-208ENST00000417285 HSPA7P48741 367 aa23.71■■□□□ 1.39
VEGFA-208ENST00000417285 CYB561P49447 251 aa23.71■■□□□ 1.39
VEGFA-208ENST00000417285 HSD17B7P56937 341 aa23.71■■□□□ 1.39
VEGFA-208ENST00000417285 TERF2Q15554 542 aa23.71■■□□□ 1.39
VEGFA-208ENST00000417285 ARMC10Q8N2F6 343 aa23.71■■□□□ 1.39
VEGFA-208ENST00000417285 SNX31Q8N9S9 440 aa23.71■■□□□ 1.39
VEGFA-208ENST00000417285 NFAM1Q8NET5 270 aaPredicted RBP23.71■■□□□ 1.39
VEGFA-208ENST00000417285 ADAMTS18Q8TE60 1221 aa23.71■■□□□ 1.39
VEGFA-208ENST00000417285 CCT6BQ92526 530 aa23.71■■□□□ 1.39
VEGFA-208ENST00000417285 C16orf45Q96MC5 204 aaPredicted RBP23.71■■□□□ 1.39
VEGFA-208ENST00000417285 DEFB126Q9BYW3 111 aa23.71■■□□□ 1.39
VEGFA-208ENST00000417285 AICDAQ9GZX7 198 aa23.71■■□□□ 1.39
VEGFA-208ENST00000417285 TRIM45Q9H8W5 580 aaPredicted RBP23.71■■□□□ 1.39
VEGFA-208ENST00000417285 NECTIN3Q9NQS3 549 aa23.71■■□□□ 1.39
VEGFA-208ENST00000417285 ENTPD4Q9Y227 616 aa23.71■■□□□ 1.39
VEGFA-208ENST00000417285 CACNA1DQ01668 2161 aa23.71■■□□□ 1.39
VEGFA-208ENST00000417285 ESYT3A0FGR9 886 aa23.7■■□□□ 1.38
VEGFA-208ENST00000417285 SYNDIG1LA6NDD5 238 aa23.7■■□□□ 1.38
VEGFA-208ENST00000417285 CCL21O00585 134 aa23.7■■□□□ 1.38
VEGFA-208ENST00000417285 ERI3O43414 337 aaKnown RBP23.7■■□□□ 1.38
VEGFA-208ENST00000417285 B3GALT2O43825 422 aa23.7■■□□□ 1.38
VEGFA-208ENST00000417285 NEURL1O76050 574 aa23.7■■□□□ 1.38
VEGFA-208ENST00000417285 URI1O94763 535 aaPredicted RBP23.7■■□□□ 1.38
VEGFA-208ENST00000417285 TRHRP34981 398 aaPredicted RBP23.7■■□□□ 1.38
VEGFA-208ENST00000417285 CA7P43166 264 aa23.7■■□□□ 1.38
VEGFA-208ENST00000417285 MLF1P58340 268 aa23.7■■□□□ 1.38
VEGFA-208ENST00000417285 PMP22Q01453 160 aa23.7■■□□□ 1.38
VEGFA-208ENST00000417285 ALDH6A1Q02252 535 aaKnown RBP23.7■■□□□ 1.38
VEGFA-208ENST00000417285 GUCY2DQ02846 1103 aa23.7■■□□□ 1.38
VEGFA-208ENST00000417285 LAPTM5Q13571 262 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms