RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 STXBP1P61764 594 aaKnown RBP20.38■□□□□ 0.85
ACTB-203ENST00000417101 GNG11P61952 73 aa20.38■□□□□ 0.85
ACTB-203ENST00000417101 ZNF630Q2M218 657 aaPredicted RBP20.38■□□□□ 0.85
ACTB-203ENST00000417101 Q6ZPB1 254 aaPredicted RBP20.38■□□□□ 0.85
ACTB-203ENST00000417101 ZNF227Q86WZ6 799 aa20.38■□□□□ 0.85
ACTB-203ENST00000417101 ADAMTS18Q8TE60 1221 aa20.38■□□□□ 0.85
ACTB-203ENST00000417101 GAL3ST3Q96A11 431 aa20.38■□□□□ 0.85
ACTB-203ENST00000417101 TMEM125Q96AQ2 219 aa20.38■□□□□ 0.85
ACTB-203ENST00000417101 RHBDF1Q96CC6 855 aa20.38■□□□□ 0.85
ACTB-203ENST00000417101 FAR2Q96K12 515 aa20.38■□□□□ 0.85
ACTB-203ENST00000417101 RHOJQ9H4E5 214 aa20.38■□□□□ 0.85
ACTB-203ENST00000417101 CHST11Q9NPF2 352 aa20.38■□□□□ 0.85
ACTB-203ENST00000417101 DCHS2Q6V1P9 2916 aa20.38■□□□□ 0.85
ACTB-203ENST00000417101 PKDREJQ9NTG1 2253 aa20.37■□□□□ 0.85
ACTB-203ENST00000417101 NCF1BA6NI72 391 aaPredicted RBP20.37■□□□□ 0.85
ACTB-203ENST00000417101 NCF1CA8MVU1 366 aaPredicted RBP20.37■□□□□ 0.85
ACTB-203ENST00000417101 E7ESA3 106 aa20.37■□□□□ 0.85
ACTB-203ENST00000417101 MYO1DO94832 1006 aa20.37■□□□□ 0.85
ACTB-203ENST00000417101 SNRPB2P08579 225 aaKnown RBP20.37■□□□□ 0.85
ACTB-203ENST00000417101 NCF1P14598 390 aaPredicted RBP20.37■□□□□ 0.85
ACTB-203ENST00000417101 ZNF24P17028 368 aa20.37■□□□□ 0.85
ACTB-203ENST00000417101 HNRNPH1P31943 449 aaKnown RBP20.37■□□□□ 0.85
ACTB-203ENST00000417101 TRHRP34981 398 aaPredicted RBP20.37■□□□□ 0.85
ACTB-203ENST00000417101 SLC6A12P48065 614 aa20.37■□□□□ 0.85
ACTB-203ENST00000417101 SMSP52788 366 aa20.37■□□□□ 0.85
ACTB-203ENST00000417101 SLC12A2P55011 1212 aa20.37■□□□□ 0.85
ACTB-203ENST00000417101 HSF1Q00613 529 aa20.37■□□□□ 0.85
ACTB-203ENST00000417101 SLBPQ14493 270 aaKnown RBP eCLIP20.37■□□□□ 0.85
ACTB-203ENST00000417101 RNFT1Q5M7Z0 435 aa20.37■□□□□ 0.85
ACTB-203ENST00000417101 TMIGD1Q6UXZ0 262 aa20.37■□□□□ 0.85
ACTB-203ENST00000417101 CAPN12Q6ZSI9 719 aa20.37■□□□□ 0.85
ACTB-203ENST00000417101 KLHDC8AQ8IYD2 350 aa20.37■□□□□ 0.85
ACTB-203ENST00000417101 CPSF7Q8N684 471 aaKnown RBP20.37■□□□□ 0.85
ACTB-203ENST00000417101 CCT6BQ92526 530 aa20.37■□□□□ 0.85
ACTB-203ENST00000417101 PDLIM2Q96JY6 352 aa20.37■□□□□ 0.85
ACTB-203ENST00000417101 TRIM45Q9H8W5 580 aaPredicted RBP20.37■□□□□ 0.85
ACTB-203ENST00000417101 GRPEL1Q9HAV7 217 aa20.37■□□□□ 0.85
ACTB-203ENST00000417101 NSMCE4AQ9NXX6 385 aa20.37■□□□□ 0.85
ACTB-203ENST00000417101 SNX24Q9Y343 169 aa20.37■□□□□ 0.85
ACTB-203ENST00000417101 MMACHCQ9Y4U1 282 aa20.37■□□□□ 0.85
ACTB-203ENST00000417101 SAR1BQ9Y6B6 198 aa20.37■□□□□ 0.85
ACTB-203ENST00000417101 OTOGQ6ZRI0 2925 aa20.37■□□□□ 0.85
ACTB-203ENST00000417101 TRBV11-1A0A0K0K1C0 115 aa20.36■□□□□ 0.85
ACTB-203ENST00000417101 CCDC188H7C350 402 aa20.36■□□□□ 0.85
ACTB-203ENST00000417101 FCHO1O14526 889 aa20.36■□□□□ 0.85
ACTB-203ENST00000417101 ERI3O43414 337 aaKnown RBP20.36■□□□□ 0.85
ACTB-203ENST00000417101 ABOP16442 354 aa20.36■□□□□ 0.85
ACTB-203ENST00000417101 RPL21P46778 160 aaKnown RBP20.36■□□□□ 0.85
ACTB-203ENST00000417101 RUNX2Q13950 521 aa20.36■□□□□ 0.85
ACTB-203ENST00000417101 ZBED8Q8IZ13 594 aa20.36■□□□□ 0.85
ACTB-203ENST00000417101 GHDCQ8N2G8 530 aa20.36■□□□□ 0.85
ACTB-203ENST00000417101 SPATA6LQ8N4H0 392 aa20.36■□□□□ 0.85
ACTB-203ENST00000417101 APCDD1LQ8NCL9 501 aa20.36■□□□□ 0.85
ACTB-203ENST00000417101 B3GNT7Q8NFL0 401 aa20.36■□□□□ 0.85
ACTB-203ENST00000417101 TTLQ8NG68 377 aa20.36■□□□□ 0.85
ACTB-203ENST00000417101 NAPGQ99747 312 aaPredicted RBP20.36■□□□□ 0.85
ACTB-203ENST00000417101 MCMBPQ9BTE3 642 aa20.36■□□□□ 0.85
ACTB-203ENST00000417101 POPDC3Q9HBV1 291 aa20.36■□□□□ 0.85
ACTB-203ENST00000417101 SMYD2Q9NRG4 433 aa20.36■□□□□ 0.85
ACTB-203ENST00000417101 PNO1Q9NRX1 252 aaKnown RBP20.36■□□□□ 0.85
ACTB-203ENST00000417101 MTO1Q9Y2Z2 717 aaKnown RBP20.36■□□□□ 0.85
ACTB-203ENST00000417101 TACC2O95359 2948 aa20.36■□□□□ 0.85
ACTB-203ENST00000417101 ADGRG4Q8IZF6 3080 aa20.35■□□□□ 0.85
ACTB-203ENST00000417101 LRIT2A6NDA9 550 aa20.35■□□□□ 0.85
ACTB-203ENST00000417101 COX6B1P14854 86 aa20.35■□□□□ 0.85
ACTB-203ENST00000417101 PAFAH1B1P43034 410 aa20.35■□□□□ 0.85
ACTB-203ENST00000417101 CLCN2P51788 898 aa20.35■□□□□ 0.85
ACTB-203ENST00000417101 TGFBIQ15582 683 aa20.35■□□□□ 0.85
ACTB-203ENST00000417101 CHERPQ8IWX8 916 aaKnown RBP20.35■□□□□ 0.85
ACTB-203ENST00000417101 SCUBE1Q8IWY4 988 aa20.35■□□□□ 0.85
ACTB-203ENST00000417101 ARMC10Q8N2F6 343 aa20.35■□□□□ 0.85
ACTB-203ENST00000417101 MS4A6EQ96DS6 147 aa20.35■□□□□ 0.85
ACTB-203ENST00000417101 KRT12Q99456 494 aa20.35■□□□□ 0.85
ACTB-203ENST00000417101 DERL2Q9GZP9 239 aa20.35■□□□□ 0.85
ACTB-203ENST00000417101 CAB39LQ9H9S4 337 aa20.35■□□□□ 0.85
ACTB-203ENST00000417101 FBXW2Q9UKT8 454 aa20.35■□□□□ 0.85
ACTB-203ENST00000417101 MEMO1Q9Y316 297 aa20.35■□□□□ 0.85
ACTB-203ENST00000417101 AGAP20933 346 aa20.34■□□□□ 0.85
ACTB-203ENST00000417101 PPP2R1BP30154 601 aa20.34■□□□□ 0.85
ACTB-203ENST00000417101 PTGER4P35408 488 aa20.34■□□□□ 0.85
ACTB-203ENST00000417101 HNRNPFP52597 415 aaKnown RBP20.34■□□□□ 0.85
ACTB-203ENST00000417101 MRPS25P82663 173 aaKnown RBP20.34■□□□□ 0.85
ACTB-203ENST00000417101 POU4F1Q01851 419 aa20.34■□□□□ 0.85
ACTB-203ENST00000417101 FBXO48Q5FWF7 155 aa20.34■□□□□ 0.85
ACTB-203ENST00000417101 NCCRP1Q6ZVX7 275 aaPredicted RBP20.34■□□□□ 0.85
ACTB-203ENST00000417101 GDF7Q7Z4P5 450 aa20.34■□□□□ 0.85
ACTB-203ENST00000417101 KRT78Q8N1N4 520 aa20.34■□□□□ 0.85
ACTB-203ENST00000417101 TMEM52Q8NDY8 209 aa20.34■□□□□ 0.85
ACTB-203ENST00000417101 AGAP11Q8TF27 550 aa20.34■□□□□ 0.85
ACTB-203ENST00000417101 NPLQ9BXD5 320 aaPredicted RBP20.34■□□□□ 0.85
ACTB-203ENST00000417101 CAPS2Q9BXY5 557 aa20.34■□□□□ 0.85
ACTB-203ENST00000417101 PRTFDC1Q9NRG1 225 aa20.34■□□□□ 0.85
ACTB-203ENST00000417101 WWOXQ9NZC7 414 aa20.34■□□□□ 0.85
ACTB-203ENST00000417101 CSMD2Q7Z408 3487 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 ANKDD1BA6NHY2 528 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 TGFBR3LH3BV60 316 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 TAPBPO15533 448 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 B3GALT2O43825 422 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 CLEC3AO75596 197 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 WISP3O95389 354 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms