RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 SERPINA6P08185 405 aa13.84□□□□□ -0.19
RPS28-201ENST00000417088 ZNF37AP17032 561 aaPredicted RBP13.84□□□□□ -0.19
RPS28-201ENST00000417088 SSTR2P30874 369 aa13.84□□□□□ -0.19
RPS28-201ENST00000417088 MEOX1P50221 254 aa13.84□□□□□ -0.19
RPS28-201ENST00000417088 SULF2Q8IWU5 870 aa13.84□□□□□ -0.19
RPS28-201ENST00000417088 POGLUT1Q8NBL1 392 aa13.84□□□□□ -0.19
RPS28-201ENST00000417088 ARMC2Q8NEN0 867 aa13.84□□□□□ -0.19
RPS28-201ENST00000417088 SLCO2A1Q92959 643 aa13.84□□□□□ -0.19
RPS28-201ENST00000417088 PDLIM2Q96JY6 352 aa13.84□□□□□ -0.19
RPS28-201ENST00000417088 SNX12Q9UMY4 172 aa13.84□□□□□ -0.19
RPS28-201ENST00000417088 KLF13Q9Y2Y9 288 aaPredicted RBP13.84□□□□□ -0.19
RPS28-201ENST00000417088 PSAT1Q9Y617 370 aa13.84□□□□□ -0.19
RPS28-201ENST00000417088 TRBV11-1A0A0K0K1C0 115 aa13.83□□□□□ -0.2
RPS28-201ENST00000417088 NPEPPSL1A6NEC2 478 aa13.83□□□□□ -0.2
RPS28-201ENST00000417088 CES2O00748 559 aa13.83□□□□□ -0.2
RPS28-201ENST00000417088 PEX1O43933 1283 aa13.83□□□□□ -0.2
RPS28-201ENST00000417088 RFC3P40938 356 aa13.83□□□□□ -0.2
RPS28-201ENST00000417088 KRTAP10-9P60411 292 aa13.83□□□□□ -0.2
RPS28-201ENST00000417088 BTN3A2P78410 334 aa13.83□□□□□ -0.2
RPS28-201ENST00000417088 RUNX2Q13950 521 aa13.83□□□□□ -0.2
RPS28-201ENST00000417088 STEAP4Q687X5 459 aa13.83□□□□□ -0.2
RPS28-201ENST00000417088 CEP97Q8IW35 865 aa13.83□□□□□ -0.2
RPS28-201ENST00000417088 PDIK1LQ8N165 341 aa13.83□□□□□ -0.2
RPS28-201ENST00000417088 NKAPQ8N5F7 415 aaKnown RBP13.83□□□□□ -0.2
RPS28-201ENST00000417088 ACBD4Q8NC06 268 aa13.83□□□□□ -0.2
RPS28-201ENST00000417088 B3GNT7Q8NFL0 401 aa13.83□□□□□ -0.2
RPS28-201ENST00000417088 C16orf52Q8NHV5 167 aa13.83□□□□□ -0.2
RPS28-201ENST00000417088 ANKRD7Q92527 254 aa13.83□□□□□ -0.2
RPS28-201ENST00000417088 SPOCK3Q9BQ16 436 aa13.83□□□□□ -0.2
RPS28-201ENST00000417088 ENKD1Q9H0I2 346 aa13.83□□□□□ -0.2
RPS28-201ENST00000417088 ZNF223Q9UK11 482 aaPredicted RBP13.83□□□□□ -0.2
RPS28-201ENST00000417088 PPT2Q9UMR5 302 aa13.83□□□□□ -0.2
RPS28-201ENST00000417088 MMACHCQ9Y4U1 282 aa13.83□□□□□ -0.2
RPS28-201ENST00000417088 TEX264Q9Y6I9 313 aa13.83□□□□□ -0.2
RPS28-201ENST00000417088 HIVEP1P15822 2718 aa13.83□□□□□ -0.2
RPS28-201ENST00000417088 C2CD3Q4AC94 2353 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 A0A1B0GTH9 108 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 KLRC4-KLRK1H3BQV0 150 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 TFECO14948 347 aaPredicted RBP13.82□□□□□ -0.2
RPS28-201ENST00000417088 ITGA10O75578 1167 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 MYO1DO94832 1006 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 C1GALT1C1LP0DN25 315 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 SAT1P21673 171 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 PPP2R1BP30154 601 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 PTGS2P35354 604 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 CLCN2P51788 898 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 STXBP1P61764 594 aaKnown RBP13.82□□□□□ -0.2
RPS28-201ENST00000417088 CDKL1Q00532 357 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 FRG1Q14331 258 aaKnown RBP13.82□□□□□ -0.2
RPS28-201ENST00000417088 ZNF460Q14592 562 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 MORF4L2Q15014 288 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 TERF2Q15554 542 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 C18orf21Q32NC0 220 aaPredicted RBP13.82□□□□□ -0.2
RPS28-201ENST00000417088 CMPK2Q5EBM0 449 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 SLCO4C1Q6ZQN7 724 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 MDGA2Q7Z553 956 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 ZC3HC1Q86WB0 502 aaKnown RBP13.82□□□□□ -0.2
RPS28-201ENST00000417088 SCUBE1Q8IWY4 988 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.82□□□□□ -0.2
RPS28-201ENST00000417088 EID3Q8N140 333 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 FAM57AQ8TBR7 257 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 GAL3ST3Q96A11 431 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 SDCCAG3Q96C92 435 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 LRRC39Q96DD0 335 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 C14orf79Q96F83 325 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 PNO1Q9NRX1 252 aaKnown RBP13.82□□□□□ -0.2
RPS28-201ENST00000417088 ITGB1BP2Q9UKP3 347 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 FBXW2Q9UKT8 454 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 PPIEQ9UNP9 301 aaKnown RBP13.82□□□□□ -0.2
RPS28-201ENST00000417088 OARD1Q9Y530 152 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 CLDN16Q9Y5I7 305 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 HRH3Q9Y5N1 445 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 CELSR1Q9NYQ6 3014 aa13.82□□□□□ -0.2
RPS28-201ENST00000417088 A0A0G2JN53 185 aa13.81□□□□□ -0.2
RPS28-201ENST00000417088 TGFBR3LH3BV60 316 aa13.81□□□□□ -0.2
RPS28-201ENST00000417088 HS6ST1O60243 411 aa13.81□□□□□ -0.2
RPS28-201ENST00000417088 TPOP07202 933 aa13.81□□□□□ -0.2
RPS28-201ENST00000417088 HNRNPH1P31943 449 aaKnown RBP13.81□□□□□ -0.2
RPS28-201ENST00000417088 GDF5P43026 501 aa13.81□□□□□ -0.2
RPS28-201ENST00000417088 HNMTP50135 292 aa13.81□□□□□ -0.2
RPS28-201ENST00000417088 GPR143P51810 404 aa13.81□□□□□ -0.2
RPS28-201ENST00000417088 HNRNPFP52597 415 aaKnown RBP13.81□□□□□ -0.2
RPS28-201ENST00000417088 TAS2R39P59534 338 aa13.81□□□□□ -0.2
RPS28-201ENST00000417088 KLHDC8AQ8IYD2 350 aa13.81□□□□□ -0.2
RPS28-201ENST00000417088 CYP4Z2PQ8N1L4 340 aa13.81□□□□□ -0.2
RPS28-201ENST00000417088 MARVELD2Q8N4S9 558 aa13.81□□□□□ -0.2
RPS28-201ENST00000417088 TMEM156Q8N614 296 aa13.81□□□□□ -0.2
RPS28-201ENST00000417088 ZFP62Q8NB50 900 aaPredicted RBP13.81□□□□□ -0.2
RPS28-201ENST00000417088 TMEM52Q8NDY8 209 aa13.81□□□□□ -0.2
RPS28-201ENST00000417088 CA5BP1Q8WTZ4 195 aa13.81□□□□□ -0.2
RPS28-201ENST00000417088 ANKRD49Q8WVL7 239 aa13.81□□□□□ -0.2
RPS28-201ENST00000417088 MS4A6EQ96DS6 147 aa13.81□□□□□ -0.2
RPS28-201ENST00000417088 FAR2Q96K12 515 aa13.81□□□□□ -0.2
RPS28-201ENST00000417088 QRFPRQ96P65 431 aa13.81□□□□□ -0.2
RPS28-201ENST00000417088 EGFL8Q99944 293 aa13.81□□□□□ -0.2
RPS28-201ENST00000417088 NPLQ9BXD5 320 aaPredicted RBP13.81□□□□□ -0.2
RPS28-201ENST00000417088 FAM95CA0A1B0GW59 222 aa13.8□□□□□ -0.2
RPS28-201ENST00000417088 LRIT2A6NDA9 550 aa13.8□□□□□ -0.2
RPS28-201ENST00000417088 PRKNO60260 465 aaPredicted RBP13.8□□□□□ -0.2
RPS28-201ENST00000417088 H2AFYO75367 372 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms