RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 HS3ST4Q9Y661 456 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 LINC00862A6NCI5 91 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 INMT-MINDY4F8WBC2 141 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 FPGTO14772 594 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 LYRM1O43325 122 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 SUV39H1O43463 412 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 ORC5O43913 435 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 KCNK5O95279 499 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 INHAP05111 366 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 FEN1P39748 380 aaKnown RBP14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 RHAGQ02094 409 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 P2RY14Q15391 338 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 AANATQ16613 207 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 IQCCQ4KMZ1 466 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 DGKKQ5KSL6 1271 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 PLPP6Q8IY26 295 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 DENND6BQ8NEG7 585 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 ARRDC2Q8TBH0 407 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 TBC1D20Q96BZ9 403 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 C1orf74Q96LT6 269 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 C11orf16Q9NQ32 467 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 RBFOX1Q9NWB1 397 aaKnown RBP14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 DNAJC27Q9NZQ0 273 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 NYNRINQ9P2P1 1898 aaKnown RBP14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 ZNF670-ZNF695F2Z2N8 137 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 PCDH17O14917 1159 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 FFAR2O15552 330 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 LRRTM2O43300 516 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 TBX18O95935 607 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 HOXB6P17509 224 aaKnown RBP14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 HOXD10P28358 340 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 CDC42P60953 191 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 LRRC32Q14392 662 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 ZNF235Q14590 738 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 SPHARQ15513 63 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 PLAG1Q6DJT9 500 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 PAQR6Q6TCH4 344 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 TMIGD1Q6UXZ0 262 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 CFAP77Q6ZQR2 320 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 GLT6D1Q7Z4J2 308 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 SCN4BQ8IWT1 228 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 FBXW5Q969U6 566 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 TMEM245Q9H330 911 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 MCCC2Q9HCC0 563 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 CLN6Q9NWW5 311 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 ATP6V1HQ9UI12 483 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 ING4Q9UNL4 249 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 VPS9D1Q9Y2B5 631 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 PCDHGA2Q9Y5H1 932 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 LOC730098B7Z3J9 87 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 SLC28A1O00337 649 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 MSL3P1P0C860 447 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 SRCP12931 536 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 SDC2P34741 201 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 OR1G1P47890 313 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 MBTPS1Q14703 1052 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 PCBP1Q15365 356 aaKnown RBP eCLIP14.13□□□□□ -0.152e-7■■■□□ 17
NCKIPSD-204ENST00000416649 FCN2Q15485 313 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 ALFQ53S48 1182 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 XKR4Q5GH76 650 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 CBLL1Q75N03 491 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 PRSS42Q7Z5A4 293 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 LRRTM3Q86VH5 581 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 CREB3L4Q8TEY5 395 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 WDFY2Q96P53 400 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 EBPLQ9BY08 206 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 SPNS1Q9H2V7 528 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 STARD7Q9NQZ5 370 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 RDH8Q9NYR8 311 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 PPT2Q9UMR5 302 aa14.13□□□□□ -0.15
NCKIPSD-204ENST00000416649 PRAMEF33A0A0G2JMD5 474 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 PRAMEF10O60809 474 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 FCER2P06734 321 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 CKBP12277 381 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 CRYBB2P43320 205 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 TEKQ02763 1124 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 UPP1Q16831 310 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 EXOC3L2Q2M3D2 409 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 KLHL12Q53G59 568 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 LRIF1Q5T3J3 769 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 MLIPQ5VWP3 458 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 CHMP1BQ7LBR1 199 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 RTN4RL1Q86UN2 441 aaPredicted RBP14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 TRIM69Q86WT6 500 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 TOP6BLQ8N6T0 577 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 SYT14Q8NB59 555 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 PIH1D2Q8WWB5 315 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 ST8SIA2Q92186 375 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 LIN7BQ9HAP6 207 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 SEC14L4Q9UDX3 406 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 YARS2Q9Y2Z4 477 aaKnown RBP14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 LOC285095A0A1B0GVY8 99 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 CSO75390 466 aaKnown RBP14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 ALDH1A1P00352 501 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 FGF1P05230 155 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 SCG5P05408 212 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 CFL1P23528 166 aaKnown RBP14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 CTAG1AP78358 180 aa14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 PTGES3Q15185 160 aaKnown RBP14.12□□□□□ -0.15
NCKIPSD-204ENST00000416649 ANGPT1Q15389 498 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms