RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 PAQR3Q6TCH7 311 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 RGS9BPQ6ZS82 235 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 TGIF2LYQ8IUE0 185 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 MYO1HQ8N1T3 1032 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 TRPV3Q8NET8 790 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 PYCR2Q96C36 320 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 SERPINB12Q96P63 405 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 ZDHHC11Q9H8X9 412 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 TIMMDC1Q9NPL8 285 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 DEPPQ9NTK1 212 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 ZNF223Q9UK11 482 aaPredicted RBP14.34□□□□□ -0.11
DDX56-202ENST00000415758 YARS2Q9Y2Z4 477 aaKnown RBP14.34□□□□□ -0.11
DDX56-202ENST00000415758 MMACHCQ9Y4U1 282 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 ACANP16112 2415 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 ABCA4P78363 2273 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 ABCA2Q9BZC7 2435 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 TRBV11-1A0A0K0K1C0 115 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 OR14I1A6ND48 311 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 PSMD12O00232 456 aaPredicted RBP14.33□□□□□ -0.12
DDX56-202ENST00000415758 SERPIND1P05546 499 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 NR0B1P51843 470 aaKnown RBP14.33□□□□□ -0.12
DDX56-202ENST00000415758 TERF1P54274 439 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 FOLH1Q04609 750 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 CSHL1Q14406 222 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 HSP90AA5PQ58FG0 334 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 GPALPP1Q8IXQ4 340 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 AGGF1Q8N302 714 aaeCLIP14.33□□□□□ -0.12
DDX56-202ENST00000415758 ANKRD53Q8N9V6 530 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 PSD4Q8NDX1 1056 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 CHDHQ8NE62 594 aaPredicted RBP14.33□□□□□ -0.12
DDX56-202ENST00000415758 MYRIPQ8NFW9 859 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 NRGNQ92686 78 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 NEIL2Q969S2 332 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 VMP1Q96GC9 406 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 SIGLEC10Q96LC7 697 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 FAM167BQ9BTA0 163 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 DEFB127Q9H1M4 99 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 SPNS1Q9H2V7 528 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 ARL15Q9NXU5 204 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 FBXW2Q9UKT8 454 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 AKAP6Q13023 2319 aa14.33□□□□□ -0.12
DDX56-202ENST00000415758 TMEM200CA6NKL6 621 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 A8MUA0 341 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 CTAG2O75638 210 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 MYO1DO94832 1006 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 ZWINTO95229 277 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 IGHG3P01860 377 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 KRT14P02533 472 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 ACVR2AP27037 513 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 VPS41P49754 854 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 SSR4P51571 173 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 RAB8AP61006 207 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 PPIAP62937 165 aaKnown RBP14.32□□□□□ -0.12
DDX56-202ENST00000415758 MYBPHQ13203 477 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 BBS9Q3SYG4 887 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 SCUBE1Q8IWY4 988 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 CA13Q8N1Q1 262 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 C2CD4AQ8NCU7 369 aaPredicted RBP14.32□□□□□ -0.12
DDX56-202ENST00000415758 OR5M3Q8NGP4 307 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 CREB3L4Q8TEY5 395 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 SLC5A11Q8WWX8 675 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 ATL1Q8WXF7 558 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 FBXL8Q96CD0 374 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 PDLIM2Q96JY6 352 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 NDNQ99608 321 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 TTYH2Q9BSA4 534 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 TRIM54Q9BYV2 358 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 KLHL31Q9H511 634 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 PNPLA3Q9NST1 481 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 KCMF1Q9P0J7 381 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 CLDN16Q9Y5I7 305 aa14.32□□□□□ -0.12
DDX56-202ENST00000415758 A0A1B0GVC2 190 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 CTAGE15A4D2H0 777 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 PINLYPA6NC86 204 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 NPIPA2E9PIF3 369 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 NPIPA3F8WFD2 350 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 BCKDKO14874 412 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 FAM155BO75949 473 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 ZFAND5O76080 213 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 GLSO94925 669 aaPredicted RBP14.31□□□□□ -0.12
DDX56-202ENST00000415758 SERPINA6P08185 405 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 GABRB3P28472 473 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 CDKN2DP55273 166 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 DLX5P56178 289 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 HSD17B7P56937 341 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 IL2P60568 153 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 REEP5Q00765 189 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 NDUFAF5Q5TEU4 345 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 CTAGE6Q86UF2 777 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.31□□□□□ -0.12
DDX56-202ENST00000415758 OR2M7Q8NG81 312 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 LINGO1Q96FE5 620 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 CCDC77Q9BR77 488 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 PELI2Q9HAT8 420 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 IARS2Q9NSE4 1012 aaKnown RBP14.31□□□□□ -0.12
DDX56-202ENST00000415758 CCM2LQ9NUG4 571 aaPredicted RBP14.31□□□□□ -0.12
DDX56-202ENST00000415758 DNAJB12Q9NXW2 375 aaKnown RBP14.31□□□□□ -0.12
DDX56-202ENST00000415758 MYOTQ9UBF9 498 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 ERVK-11Q9UQG0 969 aa14.31□□□□□ -0.12
DDX56-202ENST00000415758 L3MBTL1Q9Y468 752 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms