RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 MYLK4Q86YV6 388 aaPredicted RBP10.55□□□□□ -0.72
RFFL-204ENST00000414419 SHISA5Q8N114 240 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 CYP4X1Q8N118 509 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 CA13Q8N1Q1 262 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 CISD2Q8N5K1 135 aaKnown RBP10.55□□□□□ -0.72
RFFL-204ENST00000414419 TEX9Q8N6V9 391 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 GALNT11Q8NCW6 608 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 SRFBP1Q8NEF9 429 aaKnown RBP10.55□□□□□ -0.72
RFFL-204ENST00000414419 OR2L5Q8NG80 312 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 UBTD2Q8WUN7 234 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 MS4A6EQ96DS6 147 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 SMIM10Q96HG1 83 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 IMMP1LQ96LU5 166 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 NPLQ9BXD5 320 aaPredicted RBP10.55□□□□□ -0.72
RFFL-204ENST00000414419 KCNK13Q9HB14 408 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 LANCL2Q9NS86 450 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 STMN3Q9NZ72 180 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 ZNF180Q9UJW8 692 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 ZNF490Q9ULM2 529 aaPredicted RBP10.55□□□□□ -0.72
RFFL-204ENST00000414419 TMCO1Q9UM00 188 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 TNPO3Q9Y5L0 923 aaKnown RBP10.55□□□□□ -0.72
RFFL-204ENST00000414419 COPG1Q9Y678 874 aaKnown RBP10.55□□□□□ -0.72
RFFL-204ENST00000414419 ZGRF1Q86YA3 2104 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 TRIM49D1C9J1S8 452 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 CLDN4O14493 209 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 DNAJB6O75190 326 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 CELA2AP08217 269 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 SNRPAP09012 282 aaKnown RBP10.54□□□□□ -0.72
RFFL-204ENST00000414419 COL6A2P12110 1019 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 MTHFD2P13995 350 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 SERPINB1P30740 379 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 ARL1P40616 181 aaPredicted RBP10.54□□□□□ -0.72
RFFL-204ENST00000414419 CASP2P42575 452 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 PIK3CGP48736 1102 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 TAS2R50P59544 299 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 PHEXP78562 749 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 ZNF33BQ06732 778 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 NAA30Q147X3 362 aaPredicted RBP10.54□□□□□ -0.72
RFFL-204ENST00000414419 ZNF169Q14929 603 aaPredicted RBP10.54□□□□□ -0.72
RFFL-204ENST00000414419 PRR30Q53SZ7 412 aaPredicted RBP10.54□□□□□ -0.72
RFFL-204ENST00000414419 QSOX2Q6ZRP7 698 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 CHSY3Q70JA7 882 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 CUZD1Q86UP6 607 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 SUN3Q8TAQ9 357 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 M1APQ8TC57 530 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 ADAMTS18Q8TE60 1221 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 DCAKDQ8WVC6 231 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 PSMF1Q92530 271 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 TSLPQ969D9 159 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 ATP6V1E2Q96A05 226 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 SNRNP40Q96DI7 357 aaKnown RBP10.54□□□□□ -0.72
RFFL-204ENST00000414419 KCNC2Q96PR1 638 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 SERINC2Q96SA4 455 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 ROGDIQ9GZN7 287 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.54□□□□□ -0.72
RFFL-204ENST00000414419 ACTR8Q9H981 624 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 PRDM9Q9NQV7 894 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 AGPAT4Q9NRZ5 378 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 ABI3Q9P2A4 366 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 ADGRE2Q9UHX3 823 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 MRPS33Q9Y291 106 aaKnown RBP10.54□□□□□ -0.72
RFFL-204ENST00000414419 ASB1Q9Y576 335 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 CSAG2Q9Y5P2 127 aa10.54□□□□□ -0.72
RFFL-204ENST00000414419 UBR5O95071 2799 aaPredicted RBP10.54□□□□□ -0.72
RFFL-204ENST00000414419 FAM227AF5H4B4 570 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 RIPK2O43353 540 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 KLK8O60259 260 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 PRAMEF4O60810 478 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 SMIM24O75264 130 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 TGFB1P01137 390 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 ABHD2P08910 425 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 EPORP19235 508 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 CD22P20273 847 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 SOX11P35716 441 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 MTTPP55157 894 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 RAB38P57729 211 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 BTG2P78543 158 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 DDX39BQ13838 428 aaKnown RBP10.53□□□□□ -0.72
RFFL-204ENST00000414419 GTF2H2Q13888 395 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 RUNX2Q13950 521 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 ELOAQ14241 798 aaKnown RBP10.53□□□□□ -0.72
RFFL-204ENST00000414419 PCBP2Q15366 365 aaKnown RBP eCLIP10.53□□□□□ -0.72
RFFL-204ENST00000414419 AP5B1Q2VPB7 878 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 ADPRMQ3LIE5 342 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 TECRLQ5HYJ1 363 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 PRAMEF9Q5VWM5 478 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 LIPJQ5W064 366 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 B3GNTL1Q67FW5 361 aaPredicted RBP10.53□□□□□ -0.72
RFFL-204ENST00000414419 GRHL2Q6ISB3 625 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 GTF2H2CQ6P1K8 395 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 METTL2BQ6P1Q9 378 aaKnown RBP10.53□□□□□ -0.72
RFFL-204ENST00000414419 ABHD17CQ6PCB6 329 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 LAS2Q8IYD9 372 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 PLD6Q8N2A8 252 aaKnown RBP10.53□□□□□ -0.72
RFFL-204ENST00000414419 PTGR2Q8N8N7 351 aaPredicted RBP10.53□□□□□ -0.72
RFFL-204ENST00000414419 CATSPER1Q8NEC5 780 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 OR7G3Q8NG95 312 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 OR1N1Q8NGS0 311 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 HAS2Q92819 552 aa10.53□□□□□ -0.72
RFFL-204ENST00000414419 REPS1Q96D71 796 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms