RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 FBXO22Q8NEZ5 403 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 ASB11Q8WXH4 323 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 HHIPQ96QV1 700 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 YME1L1Q96TA2 773 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 HTATIP2Q9BUP3 242 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 SMG9Q9H0W8 520 aaKnown RBP13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 ACER3Q9NUN7 267 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 CCDC59Q9P031 241 aaKnown RBP13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 TRAV19A0A0A6YYK7 116 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 TRBV5-4A0A0C4DH59 114 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 HMGA1P17096 107 aaKnown RBP13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 IDSP22304 550 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 CD70P32970 193 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 MVDP53602 400 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 TAF12Q16514 161 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 ZNF544Q6NX49 715 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 NPAS3Q8IXF0 933 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 SLC35A5Q9BS91 424 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 AP3M1Q9Y2T2 418 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 OR51B4Q9Y5P0 310 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 MGAT4DA6NG13 374 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 CPNE3O75131 537 aaKnown RBP13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 ZNF821O75541 412 aaPredicted RBP13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 SLITRK5O94991 958 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 TGFB1P01137 390 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 IL7P13232 177 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 GJA1P17302 382 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 PRIM2P49643 509 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 RAB25P57735 213 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 GALK2Q01415 458 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 TLE2Q04725 743 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 SCARB2Q14108 478 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 TRIM71Q2Q1W2 868 aaKnown RBP13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 SMU1Q2TAY7 513 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 FAM209AQ5JX71 171 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 ZNF438Q7Z4V0 828 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 C11orf65Q8NCR3 313 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 WDR48Q8TAF3 677 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 AUTS2Q8WXX7 1259 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 OR51B5Q9H339 312 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 RDH14Q9HBH5 336 aa13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 MOV10Q9HCE1 1003 aaKnown RBP13.98□□□□□ -0.17
SEMA3F-202ENST00000413852 MEN1O00255 615 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 RGS13O14921 159 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 CDRT1O95170 752 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 MAPK1P28482 360 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 SRSF11Q05519 484 aaKnown RBP13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 NFE2L1Q14494 772 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 MPEG1Q2M385 716 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 SHFQ7M4L6 423 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 THOC6Q86W42 341 aaKnown RBP13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 L3MBTL4Q8NA19 623 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 HJURPQ8NCD3 748 aaPredicted RBP13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 ALG14Q96F25 216 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 SLC12A9Q9BXP2 914 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 NMNAT1Q9HAN9 279 aaPredicted RBP13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 C5AR2Q9P296 337 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 NRG2O14511 850 aaPredicted RBP13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 CAPN5O15484 640 aaPredicted RBP13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 AKR7A2O43488 359 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 CSO75390 466 aaKnown RBP13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 CCNB2O95067 398 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 NTN1O95631 604 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 IFI30P13284 250 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 JUPP14923 745 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 NSG1P42857 185 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 STARD3Q14849 445 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 SEC23BQ15437 767 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 SLC5A12Q1EHB4 618 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 TCTN1Q2MV58 587 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 SMUG1Q53HV7 270 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 ERICH5Q6P6B1 374 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 FAM131AQ6UXB0 335 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 TMPRSS11AQ6ZMR5 421 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 OR9Q1Q8NGQ5 310 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 HUS1BQ8NHY5 278 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 C11orf54Q9H0W9 315 aaPredicted RBP13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 TRPV5Q9NQA5 729 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 PLCXD1Q9NUJ7 323 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 Q9Y3F1 56 aa13.97□□□□□ -0.17
SEMA3F-202ENST00000413852 OR6C75A6NL08 312 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 ERVH48-1M5A8F1 160 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 SYN3O14994 580 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 AP2A2O94973 939 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 GADD45GO95257 159 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 HBQ1P09105 142 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 GPLD1P80108 840 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 UBE3AQ05086 875 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 CSTF3Q12996 717 aaKnown RBP13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 CDK10Q15131 360 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 IFI44LQ53G44 452 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 C22orf42Q6IC83 251 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 RAB43Q86YS6 212 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 CSGALNACT1Q8TDX6 532 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 OR2B2Q9GZK3 357 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 ZDHHC6Q9H6R6 413 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 ZNF556Q9HAH1 456 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 TOR4AQ9NXH8 423 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 PADI2Q9Y2J8 665 aa13.96□□□□□ -0.17
SEMA3F-202ENST00000413852 MYOFQ9NZM1 2061 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms