RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 SORBS2O94875 1100 aaKnown RBP6.02□□□□□ -1.45
USP54-202ENST00000413442 SEMA3DO95025 777 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 MED26O95402 600 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 OTCP00480 354 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 CRYABP02511 175 aaKnown RBP6.02□□□□□ -1.45
USP54-202ENST00000413442 SERPIND1P05546 499 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 ZNF888P0CJ79 500 aaPredicted RBP6.02□□□□□ -1.45
USP54-202ENST00000413442 COX6A1P12074 109 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 HSD3B1P14060 373 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 NCF1P14598 390 aaPredicted RBP6.02□□□□□ -1.45
USP54-202ENST00000413442 IL1RNP18510 177 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 HSD3B2P26439 372 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 GDF5P43026 501 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 RAB38P57729 211 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 OR4D2P58180 307 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 BTN3A2P78410 334 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 RHAGQ02094 409 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 ASPHQ12797 758 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 GTF2H2Q13888 395 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 SLBPQ14493 270 aaKnown RBP eCLIP6.02□□□□□ -1.45
USP54-202ENST00000413442 SLC29A2Q14542 456 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 ZNF460Q14592 562 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 UAP1Q16222 522 aaPredicted RBP6.02□□□□□ -1.45
USP54-202ENST00000413442 PFKFB4Q16877 469 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 KCTD19Q17RG1 926 aaPredicted RBP6.02□□□□□ -1.45
USP54-202ENST00000413442 CCDC153Q494R4 210 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 MINDY4Q4G0A6 757 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 GGTA1PQ4G0N0 100 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 DEFB134Q4QY38 66 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 TECRLQ5HYJ1 363 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 TOR1AIP1Q5JTV8 583 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 KHDRBS2Q5VWX1 349 aaKnown RBP6.02□□□□□ -1.45
USP54-202ENST00000413442 OR4C11Q6IEV9 310 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 GTF2H2CQ6P1K8 395 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 WDR93Q6P2C0 686 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 ABHD17CQ6PCB6 329 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 PAGE2Q7Z2X7 111 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 ANKRD37Q7Z713 158 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 CMC1Q7Z7K0 106 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 PTRH1Q86Y79 214 aaKnown RBP6.02□□□□□ -1.45
USP54-202ENST00000413442 GPALPP1Q8IXQ4 340 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 PARP9Q8IXQ6 854 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 ZCCHC7Q8N3Z6 543 aaKnown RBP6.02□□□□□ -1.45
USP54-202ENST00000413442 SLC5A8Q8N695 610 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 RBMXL3Q8N7X1 1067 aaKnown RBP6.02□□□□□ -1.45
USP54-202ENST00000413442 FAM98AQ8NCA5 519 aaKnown RBP6.02□□□□□ -1.45
USP54-202ENST00000413442 MORN4Q8NDC4 146 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 OR7G3Q8NG95 312 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 RDH11Q8TC12 318 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 ZNF473Q8WTR7 871 aaKnown RBP6.02□□□□□ -1.45
USP54-202ENST00000413442 DCAKDQ8WVC6 231 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 KCTD4Q8WVF5 259 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 PSMF1Q92530 271 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 ATP6V1E2Q96A05 226 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 MIB2Q96AX9 1013 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 METTL2AQ96IZ6 378 aaKnown RBP6.02□□□□□ -1.45
USP54-202ENST00000413442 ART5Q96L15 291 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 PTCHD1Q96NR3 888 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 SERPINI1Q99574 410 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 TMEM79Q9BSE2 394 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 TXLNGYQ9BZA5 131 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 ILKAPQ9H0C8 392 aaPredicted RBP6.02□□□□□ -1.45
USP54-202ENST00000413442 VPS11Q9H270 941 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 IPPKQ9H8X2 491 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 ACTR8Q9H981 624 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 WDR41Q9HAD4 459 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 BRF2Q9HAW0 419 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 ZNF160Q9HCG1 818 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 PRDM7Q9NQW5 492 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 LANCL2Q9NS86 450 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.02□□□□□ -1.45
USP54-202ENST00000413442 PSMC3IPQ9P2W1 217 aaPredicted RBP6.02□□□□□ -1.45
USP54-202ENST00000413442 PHF11Q9UIL8 331 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 MID2Q9UJV3 735 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 ADAM29Q9UKF5 820 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 IKZF3Q9UKT9 509 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 PSME2Q9UL46 239 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 DAPP1Q9UN19 280 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 SNX6Q9UNH7 406 aa6.02□□□□□ -1.45
USP54-202ENST00000413442 WBP11Q9Y2W2 641 aaKnown RBP6.02□□□□□ -1.45
USP54-202ENST00000413442 COPG1Q9Y678 874 aaKnown RBP6.02□□□□□ -1.45
USP54-202ENST00000413442 IGKV3D-11A0A0A0MRZ8 115 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 A6NL46 340 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 TRIM49D1C9J1S8 452 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 UBXN8O00124 270 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 E2F3O00716 465 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 FCHO1O14526 889 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 ERI3O43414 337 aaKnown RBP6.01□□□□□ -1.45
USP54-202ENST00000413442 NRP2O60462 931 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 DNAJB5O75953 348 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 SNUPNO95149 360 aaKnown RBP6.01□□□□□ -1.45
USP54-202ENST00000413442 DDAH2O95865 285 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 F7P08709 466 aaPredicted RBP6.01□□□□□ -1.45
USP54-202ENST00000413442 COX7A2P14406 83 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 PCSK2P16519 638 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 IMPDH1P20839 514 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 HIST1H1TP22492 207 aaPredicted RBP6.01□□□□□ -1.45
USP54-202ENST00000413442 ATP5F1P24539 256 aaPredicted RBP6.01□□□□□ -1.45
USP54-202ENST00000413442 SOX11P35716 441 aa6.01□□□□□ -1.45
USP54-202ENST00000413442 BUD31P41223 144 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms