RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 SKP1P63208 163 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 DDX39BQ13838 428 aaKnown RBP9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 GLE1Q53GS7 698 aaKnown RBP9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 CDKL4Q5MAI5 379 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 PLAG1Q6DJT9 500 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 RIPOR1Q6ZS17 1223 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 CRLF3Q8IUI8 442 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 KIF2BQ8N4N8 673 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 CEP112Q8N8E3 955 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 TMEM52Q8NDY8 209 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 TTLQ8NG68 377 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 M1APQ8TC57 530 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 HAS2Q92819 552 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 GAL3ST3Q96A11 431 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 SCYL1Q96KG9 808 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 LPAR4Q99677 370 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 RHOXF2Q9BQY4 288 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 SLC29A3Q9BZD2 475 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 REXO4Q9GZR2 422 aaKnown RBP9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 CDCP1Q9H5V8 836 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 ACSS3Q9H6R3 686 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 PNO1Q9NRX1 252 aaKnown RBP9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 CPSF2Q9P2I0 782 aaKnown RBP9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 IKBKGQ9Y6K9 419 aa9.56□□□□□ -0.88
NCKIPSD-202ENST00000413374 RELNP78509 3460 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 TENM4Q6N022 2769 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 PCM1Q15154 2024 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 ANKUB1A6NFN9 424 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 SYCE1LA8MT33 242 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 KIF2AO00139 706 aaPredicted RBP9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 B3GALT2O43825 422 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 SIX3O95343 332 aaPredicted RBP9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 TUBB4AP04350 444 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 EPB42P16452 691 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 CERS1P27544 350 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 PPP2R1BP30154 601 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 TSFMP43897 325 aaKnown RBP9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 TNFSF10P50591 281 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 SLC26A5P58743 744 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 LAPTM5Q13571 262 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 ELOAQ14241 798 aaKnown RBP9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 ACAP2Q15057 778 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 EXT1Q16394 746 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 PAGE2BQ5JRK9 111 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 ACER2Q5QJU3 275 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 NIPAL1Q6NVV3 410 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 KLC3Q6P597 504 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 TRIM40Q6P9F5 258 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 ABHD17CQ6PCB6 329 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 CEP128Q6ZU80 1094 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 LRRC70Q7Z2Q7 622 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 UBE3DQ7Z6J8 389 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 CLNKQ7Z7G1 428 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 RELL1Q8IUW5 271 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 BEST3Q8N1M1 668 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 OR2L5Q8NG80 312 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 SUN3Q8TAQ9 357 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 SLC44A1Q8WWI5 657 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 MTFMTQ96DP5 389 aaKnown RBP9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 PHF21BQ96EK2 531 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 ZNF354BQ96LW1 612 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 QRFPRQ96P65 431 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 GPR78Q96P69 363 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 PAFAH2Q99487 392 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 NPAS2Q99743 824 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 EFCAB11Q9BUY7 163 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 SORBS1Q9BX66 1292 aaKnown RBP9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 TSPYL1Q9H0U9 437 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 OR51B5Q9H339 312 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 EHD1Q9H4M9 534 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 COPS7BQ9H9Q2 264 aaPredicted RBP9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 MMP25Q9NPA2 562 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 PRDM9Q9NQV7 894 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 PRTFDC1Q9NRG1 225 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 AGPAT4Q9NRZ5 378 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 TEKT2Q9UIF3 430 aa9.55□□□□□ -0.88
NCKIPSD-202ENST00000413374 TRAV17A0A0B4J275 112 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 OR5H15A6NDH6 313 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 TRIM49D1C9J1S8 452 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 MYO1DO94832 1006 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 FAM153BP0C7A2 387 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 RNF224P0DH78 156 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 CD96P40200 585 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 ARL1P40616 181 aaPredicted RBP9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 PIK3CGP48736 1102 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 MTTPP55157 894 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 LIM2P55344 173 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 RAB38P57729 211 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 AP2B1P63010 937 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 PMP22Q01453 160 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 OC90Q02509 493 aaPredicted RBP9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 SLC13A2Q13183 592 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 SETDB1Q15047 1291 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 MEP1AQ16819 746 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 FAM153CQ494X1 144 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 TEX35Q5T0J7 233 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 HIST2H2BCQ6DN03 193 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 SPINK14Q6IE38 97 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 MED27Q6P2C8 311 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 QSOX2Q6ZRP7 698 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms