RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 CERS1P27544 350 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 CD1CP29017 333 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 S100A3P33764 101 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 RPL3P39023 403 aaKnown RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 GABRA4P48169 554 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 MTTPP55157 894 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 VSX2P58304 361 aaPredicted RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 RAB8AP61006 207 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 PSME3P61289 254 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 TRA2BP62995 288 aaKnown RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 SNRPNP63162 240 aaKnown RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 PHC1P78364 1004 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 CFHR1Q03591 330 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 SRSF11Q05519 484 aaKnown RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 TGM3Q08188 693 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 CAPRIN1Q14444 709 aaKnown RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 MAPKAPK3Q16644 382 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 MUM1Q2TAK8 710 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 PGS1Q32NB8 556 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 AMZ1Q400G9 498 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 ZNF385BQ569K4 471 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 ZC3H12BQ5HYM0 836 aaKnown RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 PERM1Q5SV97 790 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 OR4F3Q6IEY1 312 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 ANKRD26P1Q6NSI1 321 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 TMEM214Q6NUQ4 689 aaKnown RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 PRMT9Q6P2P2 845 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 PGM2L1Q6PCE3 622 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 WDR74Q6RFH5 385 aaPredicted RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 DNAJC14Q6Y2X3 702 aaPredicted RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 ABHD13Q7L211 337 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 DGLUCYQ7Z3D6 616 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 PRSS42Q7Z5A4 293 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 R3HCC1LQ7Z5L2 792 aaKnown RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 GPR180Q86V85 440 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 PLXDC1Q8IUK5 500 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 SCUBE1Q8IWY4 988 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 MMP21Q8N119 569 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 DNAJC22Q8N4W6 341 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 ZNF655Q8N720 491 aaPredicted RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 CSNK1A1LQ8N752 337 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 AMER3Q8N944 861 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 ACOT4Q8N9L9 421 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 FAM13CQ8NE31 585 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 SRFBP1Q8NEF9 429 aaKnown RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 OR7A2PQ8NGA2 310 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 OR8J2Q8NGG1 315 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 OR8K5Q8NH50 307 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 ZCCHC10Q8TBK6 192 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 UTP15Q8TED0 518 aaKnown RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 GTF2H4Q92759 462 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 NAT6Q93015 286 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 LRRC58Q96CX6 371 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 MTERF3Q96E29 417 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 ZNF764Q96H86 408 aaPredicted RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 CLPTM1LQ96KA5 538 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 OR52E6Q96RD3 313 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 CCDC3Q9BQI4 270 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 NUDT22Q9BRQ3 303 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 TBCDQ9BTW9 1192 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 DUSP26Q9BV47 211 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 ROGDIQ9GZN7 287 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 CHRNA10Q9GZZ6 450 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 KCNH6Q9H252 994 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 REEP4Q9H6H4 257 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 COPS7BQ9H9Q2 264 aaPredicted RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 IL1RL2Q9HB29 575 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 SERHLQ9NQF3 203 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 MIEF1Q9NQG6 463 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 PRDM7Q9NQW5 492 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 DNAAF2Q9NVR5 837 aaKnown RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 GID8Q9NWU2 228 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 FAM120CQ9NX05 1096 aaKnown RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 SOHLH2Q9NX45 425 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 TEX10Q9NXF1 929 aaPredicted RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 TMEM9Q9P0T7 183 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 ABCD2Q9UBJ2 740 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 KLHL3Q9UH77 587 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 SLC7A8Q9UHI5 535 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 ATP6V1HQ9UI12 483 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 CROTQ9UKG9 612 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 MAN2B2Q9Y2E5 1009 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 BTBD3Q9Y2F9 522 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 WBP11Q9Y2W2 641 aaKnown RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 MRPS2Q9Y399 296 aaKnown RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 KNL1Q8NG31 2342 aa6.32□□□□□ -1.4
VPS41-204ENST00000413141 COL5A1P20908 1838 aaPredicted RBP6.32□□□□□ -1.4
VPS41-204ENST00000413141 PI4KAP42356 2102 aa6.31□□□□□ -1.4
VPS41-204ENST00000413141 MDC1Q14676 2089 aaKnown RBP6.31□□□□□ -1.4
VPS41-204ENST00000413141 A0A096LPI6 279 aa6.31□□□□□ -1.4
VPS41-204ENST00000413141 TRBV5-3A0A0A0MS03 114 aa6.31□□□□□ -1.4
VPS41-204ENST00000413141 C15orf38-AP3S2A0A0A6YYH1 394 aa6.31□□□□□ -1.4
VPS41-204ENST00000413141 CPED1A4D0V7 1026 aa6.31□□□□□ -1.4
VPS41-204ENST00000413141 GABRR3A8MPY1 467 aa6.31□□□□□ -1.4
VPS41-204ENST00000413141 A8MUI8 341 aa6.31□□□□□ -1.4
VPS41-204ENST00000413141 H0YHG0 523 aa6.31□□□□□ -1.4
VPS41-204ENST00000413141 TBX19O60806 448 aa6.31□□□□□ -1.4
VPS41-204ENST00000413141 KCNH1O95259 989 aa6.31□□□□□ -1.4
VPS41-204ENST00000413141 ZBTB11O95625 1053 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms