RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 SMIM10L1P0DMW3 83 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 MSX1P28360 303 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 GABRB3P28472 473 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 NR0B1P51843 470 aaKnown RBP13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 AP1S2P56377 157 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 IL2P60568 153 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 RBBP5Q15291 538 aaKnown RBP13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 KRTAP21-3Q3LHN1 58 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 EMC4Q5J8M3 183 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 CES4AQ5XG92 561 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 PAOXQ6QHF9 649 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 KIAA0408Q6ZU52 694 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 TMEM200AQ86VY9 491 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 CA13Q8N1Q1 262 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 ANKRD53Q8N9V6 530 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 TRPV3Q8NET8 790 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 ATL1Q8WXF7 558 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 FBXL8Q96CD0 374 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 SMIM10Q96HG1 83 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 PDLIM2Q96JY6 352 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 TSNARE1Q96NA8 513 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 SLC6A16Q9GZN6 736 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 TIMMDC1Q9NPL8 285 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 PNO1Q9NRX1 252 aaKnown RBP13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 KCMF1Q9P0J7 381 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 ERVK-11Q9UQG0 969 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 ZNF407Q9C0G0 2248 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 NADKO95544 446 aaPredicted RBP13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 AHSGP02765 367 aa13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 TUBB4AP04350 444 aa13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 HOXD4P09016 255 aaPredicted RBP13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CDC25BP30305 580 aa13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 SSR4P51571 173 aa13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 PGGT1BP53609 377 aa13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 NUP107P57740 925 aa13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 PPIAP62937 165 aaKnown RBP13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 PDAP1Q13442 181 aaKnown RBP13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 TOR1AIP1Q5JTV8 583 aa13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 ACAD11Q709F0 780 aa13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 NAT8LQ8N9F0 302 aa13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 GABPB2Q8TAK5 448 aaPredicted RBP13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 NCLNQ969V3 563 aa13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 VMP1Q96GC9 406 aa13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 SEC16BQ96JE7 1060 aa13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 AIF1LQ9BQI0 150 aa13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CCDC77Q9BR77 488 aa13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 PELI2Q9HAT8 420 aa13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 DEPPQ9NTK1 212 aa13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 ZNF223Q9UK11 482 aaPredicted RBP13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 YARS2Q9Y2Z4 477 aaKnown RBP13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 DYRK1BQ9Y463 629 aa13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 EML6Q6ZMW3 1958 aa13.27□□□□□ -0.29
HLA-DQB2-229ENST00000411527 C4orf51C9J302 202 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 NPIPA2E9PIF3 369 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 NPIPA3F8WFD2 350 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 DNAJC13O75165 2243 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 SERPINA6P08185 405 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 PGAM1P18669 254 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 DNAJA1P31689 397 aaKnown RBP13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 BTN3A2P78410 334 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 REEP5Q00765 189 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 PLGLB1Q02325 96 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 MYBPHQ13203 477 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CRYMQ14894 314 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 TERF2Q15554 542 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 GXYLT1Q4G148 440 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 HECTD2Q5U5R9 776 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CCDC137Q6PK04 289 aaKnown RBP13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 C16orf47Q6ZP98 133 aaPredicted RBP13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 THOC6Q86W42 341 aaKnown RBP13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 PSD4Q8NDX1 1056 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 TRIM58Q8NG06 486 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 OR5M3Q8NGP4 307 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 OR10Q1Q8NGQ4 319 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 NRGNQ92686 78 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 POM121Q96HA1 1249 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 SPG11Q96JI7 2443 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 FAR2Q96K12 515 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 LIN28AQ9H9Z2 209 aaKnown RBP13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 KCNN3Q9UGI6 736 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 MMACHCQ9Y4U1 282 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 MTORP42345 2549 aa13.26□□□□□ -0.29
HLA-DQB2-229ENST00000411527 NF1P21359 2839 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 PINLYPA6NC86 204 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 FAM166BA8MTA8 275 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 A8MVJ9 347 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 GOLGA6L6A8MZA4 724 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 PRKNO60260 465 aaPredicted RBP13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 OR2J2O76002 312 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 ZFAND5O76080 213 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 ENO2P09104 434 aaPredicted RBP13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CCDC175P0C221 793 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CD99P14209 185 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 SAT1P21673 171 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 PPP2R1BP30154 601 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 GPR143P51810 404 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 RUNX2Q13950 521 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 NXPE4Q6UWF7 544 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 IL20RBQ6UXL0 311 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 TMPRSS11BQ86T26 416 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms