RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 GCSAMQ8N6F7 178 aa4.07□□□□□ -1.76
CLK1-203ENST00000409769 METTL27Q8N6F8 245 aaPredicted RBP4.07□□□□□ -1.76
CLK1-203ENST00000409769 MAB21L3Q8N8X9 362 aa4.07□□□□□ -1.76
CLK1-203ENST00000409769 IL17RCQ8NAC3 791 aa4.07□□□□□ -1.76
CLK1-203ENST00000409769 ACVR1CQ8NER5 493 aa4.07□□□□□ -1.76
CLK1-203ENST00000409769 ZNF564Q8TBZ8 553 aaPredicted RBP4.07□□□□□ -1.76
CLK1-203ENST00000409769 SPPL2BQ8TCT7 592 aa4.07□□□□□ -1.76
CLK1-203ENST00000409769 C2orf15Q8WU43 125 aaKnown RBP4.07□□□□□ -1.76
CLK1-203ENST00000409769 CTNNBL1Q8WYA6 563 aaPredicted RBP4.07□□□□□ -1.76
CLK1-203ENST00000409769 ZNF653Q96CK0 615 aa4.07□□□□□ -1.76
CLK1-203ENST00000409769 PIWIL1Q96J94 861 aaKnown RBP4.07□□□□□ -1.76
CLK1-203ENST00000409769 OR2A14Q96R47 310 aa4.07□□□□□ -1.76
CLK1-203ENST00000409769 KCNK16Q96T55 309 aa4.07□□□□□ -1.76
CLK1-203ENST00000409769 NCAPGQ9BPX3 1015 aa4.07□□□□□ -1.76
CLK1-203ENST00000409769 NUP85Q9BW27 656 aa4.07□□□□□ -1.76
CLK1-203ENST00000409769 RAB6CQ9H0N0 254 aa4.07□□□□□ -1.76
CLK1-203ENST00000409769 DMAP1Q9NPF5 467 aaPredicted RBP4.07□□□□□ -1.76
CLK1-203ENST00000409769 LZTFL1Q9NQ48 299 aa4.07□□□□□ -1.76
CLK1-203ENST00000409769 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.07□□□□□ -1.76
CLK1-203ENST00000409769 IL37Q9NZH6 218 aa4.07□□□□□ -1.76
CLK1-203ENST00000409769 ADAM22Q9P0K1 906 aa4.07□□□□□ -1.76
CLK1-203ENST00000409769 WDR35Q9P2L0 1181 aa4.07□□□□□ -1.76
CLK1-203ENST00000409769 UVRAGQ9P2Y5 699 aa4.07□□□□□ -1.76
CLK1-203ENST00000409769 CHORDC1Q9UHD1 332 aaPredicted RBP4.07□□□□□ -1.76
CLK1-203ENST00000409769 RALYQ9UKM9 306 aaKnown RBP4.07□□□□□ -1.76
CLK1-203ENST00000409769 ZNF711Q9Y462 761 aa4.07□□□□□ -1.76
CLK1-203ENST00000409769 MMP24Q9Y5R2 645 aa4.07□□□□□ -1.76
CLK1-203ENST00000409769 TRIOBPQ9H2D6 2365 aa4.07□□□□□ -1.76
CLK1-203ENST00000409769 NOTCH3Q9UM47 2321 aa4.07□□□□□ -1.76
CLK1-203ENST00000409769 DOCK4Q8N1I0 1966 aa4.07□□□□□ -1.76
CLK1-203ENST00000409769 HELZP42694 1942 aaKnown RBP4.07□□□□□ -1.76
CLK1-203ENST00000409769 CDH23Q9H251 3354 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 BRWD1Q9NSI6 2320 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 PRRC2BQ5JSZ5 2229 aaKnown RBP4.06□□□□□ -1.76
CLK1-203ENST00000409769 DOCK8Q8NF50 2099 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 FAM170AA1A519 330 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 MACROD2A1Z1Q3 448 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 FAM172BPA6NC97 362 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 EPOPA6NHQ4 379 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 SIGLEC16A6NMB1 481 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 EIF4E1BA6NMX2 242 aaKnown RBP4.06□□□□□ -1.76
CLK1-203ENST00000409769 HIDE1A8MVS5 230 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 F8VP50 259 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 TEX28O15482 410 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 ZNHIT1O43257 154 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 BUB1O43683 1085 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 LMX1BO60663 402 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 MOCS3O95396 460 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 SEC24AO95486 1093 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 ATF6P18850 670 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 BDNFP23560 247 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 CYP2F1P24903 491 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 OR1D2P34982 312 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 CTNNB1P35222 781 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 ACADSBP45954 432 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 RGS7P49802 495 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 TKTL1P51854 596 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 TERF1P54274 439 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 MAP3K7CLP57077 242 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 DAOAP59103 153 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 MRPS5P82675 430 aaKnown RBP4.06□□□□□ -1.76
CLK1-203ENST00000409769 SLC39A12Q504Y0 691 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 TMEM35AQ53FP2 167 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 RARS2Q5T160 578 aaKnown RBP4.06□□□□□ -1.76
CLK1-203ENST00000409769 CCNYL2Q5T2Q4 361 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 CYP4A22Q5TCH4 519 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 STPG1Q5TH74 334 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 LIN9Q5TKA1 542 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 NSUN5P2Q63ZY6 315 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 ACSM2BQ68CK6 577 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 PM20D1Q6GTS8 502 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 C11orf63Q6NUN7 778 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 FAM183BPQ6ZVS7 135 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 IKBIPQ70UQ0 350 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 Q75L30 129 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 SLC26A9Q7LBE3 791 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 BNIPLQ7Z465 357 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 DSG4Q86SJ6 1040 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 NT5DC3Q86UY8 548 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 SLC35F6Q8N357 371 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 NIPA2Q8N8Q9 360 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 MRPL43Q8N983 215 aaKnown RBP4.06□□□□□ -1.76
CLK1-203ENST00000409769 ATAD1Q8NBU5 361 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 MSANTD4Q8NCY6 345 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 TRIM58Q8NG06 486 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 JOSD2Q8TAC2 188 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 ZNF461Q8TAF7 563 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 BBS10Q8TAM1 723 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 IRGQQ8WZA9 623 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 SPATA17Q96L03 361 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 CEP295NLQ96MC4 621 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 C16orf45Q96MC5 204 aaPredicted RBP4.06□□□□□ -1.76
CLK1-203ENST00000409769 CMTM3Q96MX0 182 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 DACH2Q96NX9 599 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 PGLYRP2Q96PD5 576 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 KLHL5Q96PQ7 755 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 DUX3Q96PT4 197 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 TGS1Q96RS0 853 aaKnown RBP4.06□□□□□ -1.76
CLK1-203ENST00000409769 MED10Q9BTT4 135 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 C1QTNF1Q9BXJ1 281 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms