RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 PCDHGA11Q9Y5H2 935 aa29.38■■■□□ 2.29
TRAF3IP1-203ENST00000409739 CPAMD8Q8IZJ3 1885 aa29.38■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ZNF462Q96JM2 2506 aa29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 IGHV1-45A0A0A0MS14 117 aa29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 TLDC2A0PJX2 215 aa29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 DLX3O60479 287 aa29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 CLDN9O95484 217 aa29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 RNH1P13489 461 aaKnown RBP29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 HERVK_113P63132 956 aa29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 RHAGQ02094 409 aa29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 DDX39BQ13838 428 aaKnown RBP29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 MYBPC3Q14896 1274 aa29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 CPSF6Q16630 551 aaKnown RBP eCLIP29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 LANCL3Q6ZV70 420 aa29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 RIBC1Q8N443 379 aaPredicted RBP29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 HUS1BQ8NHY5 278 aa29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 METTL21AQ8WXB1 218 aa29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ATP6V1E2Q96A05 226 aa29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 NTMT1Q9BV86 223 aa29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ERVK-6Q9BXR3 956 aa29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ZNF160Q9HCG1 818 aa29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 PRM3Q9NNZ6 103 aa29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 SEMA4BQ9NPR2 832 aaPredicted RBP29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 DMRT3Q9NQL9 472 aa29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ADGRE2Q9UHX3 823 aa29.37■■■□□ 2.29
TRAF3IP1-203ENST00000409739 A0A088AWK7 358 aa29.36■■■□□ 2.29
TRAF3IP1-203ENST00000409739 B8ZZF3 427 aa29.36■■■□□ 2.29
TRAF3IP1-203ENST00000409739 TGFB1P01137 390 aa29.36■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ZNF10P21506 573 aaPredicted RBP29.36■■■□□ 2.29
TRAF3IP1-203ENST00000409739 JAK1P23458 1154 aa29.36■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ATP5F1P24539 256 aaPredicted RBP29.36■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ARL1P40616 181 aaPredicted RBP29.36■■■□□ 2.29
TRAF3IP1-203ENST00000409739 PIK3CBP42338 1070 aa29.36■■■□□ 2.29
TRAF3IP1-203ENST00000409739 TGM3Q08188 693 aa29.36■■■□□ 2.29
TRAF3IP1-203ENST00000409739 IFFO1Q0D2I5 559 aa29.36■■■□□ 2.29
TRAF3IP1-203ENST00000409739 Q0VFX4 171 aa29.36■■■□□ 2.29
TRAF3IP1-203ENST00000409739 PCOLCEQ15113 449 aa29.36■■■□□ 2.29
TRAF3IP1-203ENST00000409739 NDUFAF7Q7L592 441 aa29.36■■■□□ 2.29
TRAF3IP1-203ENST00000409739 REPS1Q96D71 796 aa29.36■■■□□ 2.29
TRAF3IP1-203ENST00000409739 CMTM7Q96FZ5 175 aa29.36■■■□□ 2.29
TRAF3IP1-203ENST00000409739 TMEM237Q96Q45 408 aa29.36■■■□□ 2.29
TRAF3IP1-203ENST00000409739 NSG1A0A0A6YYJ2 146 aa29.35■■■□□ 2.29
TRAF3IP1-203ENST00000409739 B3GALT2O43825 422 aa29.35■■■□□ 2.29
TRAF3IP1-203ENST00000409739 SH3BGRLO75368 114 aa29.35■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ITGA3P26006 1051 aa29.35■■■□□ 2.29
TRAF3IP1-203ENST00000409739 CERS1P27544 350 aa29.35■■■□□ 2.29
TRAF3IP1-203ENST00000409739 RUNX2Q13950 521 aa29.35■■■□□ 2.29
TRAF3IP1-203ENST00000409739 UBE3DQ7Z6J8 389 aa29.35■■■□□ 2.29
TRAF3IP1-203ENST00000409739 PARP9Q8IXQ6 854 aa29.35■■■□□ 2.29
TRAF3IP1-203ENST00000409739 KCNC2Q96PR1 638 aa29.35■■■□□ 2.29
TRAF3IP1-203ENST00000409739 SERINC2Q96SA4 455 aa29.35■■■□□ 2.29
TRAF3IP1-203ENST00000409739 MTERF1Q99551 399 aaKnown RBP29.35■■■□□ 2.29
TRAF3IP1-203ENST00000409739 SMAD5Q99717 465 aaKnown RBP29.35■■■□□ 2.29
TRAF3IP1-203ENST00000409739 NPLQ9BXD5 320 aaPredicted RBP29.35■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ZNF700Q9H0M5 742 aa29.35■■■□□ 2.29
TRAF3IP1-203ENST00000409739 OR51B5Q9H339 312 aa29.35■■■□□ 2.29
TRAF3IP1-203ENST00000409739 COPS7BQ9H9Q2 264 aaPredicted RBP29.35■■■□□ 2.29
TRAF3IP1-203ENST00000409739 PRDM7Q9NQW5 492 aa29.35■■■□□ 2.29
TRAF3IP1-203ENST00000409739 PCDHGB7Q9Y5F8 929 aa29.35■■■□□ 2.29
TRAF3IP1-203ENST00000409739 B4GALT2O60909 372 aa29.34■■■□□ 2.29
TRAF3IP1-203ENST00000409739 CRHR1P34998 444 aa29.34■■■□□ 2.29
TRAF3IP1-203ENST00000409739 MTTPP55157 894 aa29.34■■■□□ 2.29
TRAF3IP1-203ENST00000409739 CDH13P55290 713 aa29.34■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ABRAXAS2Q15018 415 aa29.34■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ZRSR2Q15696 482 aaKnown RBP29.34■■■□□ 2.29
TRAF3IP1-203ENST00000409739 TMEM35AQ53FP2 167 aa29.34■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ZNF678Q5SXM1 525 aa29.34■■■□□ 2.29
TRAF3IP1-203ENST00000409739 VWA5B1Q5TIE3 1220 aa29.34■■■□□ 2.29
TRAF3IP1-203ENST00000409739 KHDRBS2Q5VWX1 349 aaKnown RBP29.34■■■□□ 2.29
TRAF3IP1-203ENST00000409739 C4orf33Q8N1A6 199 aa29.34■■■□□ 2.29
TRAF3IP1-203ENST00000409739 PLPP5Q8NEB5 264 aa29.34■■■□□ 2.29
TRAF3IP1-203ENST00000409739 SRFBP1Q8NEF9 429 aaKnown RBP29.34■■■□□ 2.29
TRAF3IP1-203ENST00000409739 WDR20Q8TBZ3 569 aa29.34■■■□□ 2.29
TRAF3IP1-203ENST00000409739 TSLPQ969D9 159 aa29.34■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ZNF552Q9H707 407 aaPredicted RBP29.34■■■□□ 2.29
TRAF3IP1-203ENST00000409739 RIC8BQ9NVN3 520 aa29.34■■■□□ 2.29
TRAF3IP1-203ENST00000409739 C19orf25Q9UFG5 118 aaPredicted RBP29.34■■■□□ 2.29
TRAF3IP1-203ENST00000409739 LGALS13Q9UHV8 139 aa29.34■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ZNF451Q9Y4E5 1061 aa29.34■■■□□ 2.29
TRAF3IP1-203ENST00000409739 A0A1B0GTL3 188 aa29.33■■■□□ 2.29
TRAF3IP1-203ENST00000409739 PSMD12O00232 456 aaPredicted RBP29.33■■■□□ 2.29
TRAF3IP1-203ENST00000409739 PROCP04070 461 aa29.33■■■□□ 2.29
TRAF3IP1-203ENST00000409739 KRT4P19013 534 aa29.33■■■□□ 2.29
TRAF3IP1-203ENST00000409739 TSPAN8P19075 237 aa29.33■■■□□ 2.29
TRAF3IP1-203ENST00000409739 PHEXP78562 749 aa29.33■■■□□ 2.29
TRAF3IP1-203ENST00000409739 SLC18A2Q05940 514 aa29.33■■■□□ 2.29
TRAF3IP1-203ENST00000409739 GGTA1PQ4G0N0 100 aa29.33■■■□□ 2.29
TRAF3IP1-203ENST00000409739 UNC50Q53HI1 259 aa29.33■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ZNF793Q6ZN11 406 aa29.33■■■□□ 2.29
TRAF3IP1-203ENST00000409739 CHSY3Q70JA7 882 aa29.33■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ANKRD37Q7Z713 158 aa29.33■■■□□ 2.29
TRAF3IP1-203ENST00000409739 SLC22A9Q8IVM8 553 aa29.33■■■□□ 2.29
TRAF3IP1-203ENST00000409739 OR4F6Q8NGB9 312 aa29.33■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ROPN1BQ9BZX4 212 aaPredicted RBP29.33■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ROPN1Q9HAT0 212 aaPredicted RBP29.33■■■□□ 2.29
TRAF3IP1-203ENST00000409739 PLAAQ9Y263 795 aa29.33■■■□□ 2.29
TRAF3IP1-203ENST00000409739 CNTRLQ7Z7A1 2325 aa29.33■■■□□ 2.29
TRAF3IP1-203ENST00000409739 IGHV3-20A0A0C4DH32 117 aa29.32■■■□□ 2.28
TRAF3IP1-203ENST00000409739 MAGEB17A8MXT2 336 aa29.32■■■□□ 2.28
TRAF3IP1-203ENST00000409739 FAM227AF5H4B4 570 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms