RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 CMTM6Q9NX76 183 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 NLGN3Q9NZ94 848 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 VAPAQ9P0L0 249 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 C5AR2Q9P296 337 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 TMEM181Q9P2C4 612 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 PADI4Q9UM07 663 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 POMPQ9Y244 141 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 L3MBTL1Q9Y468 752 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 R4GN57 208 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 CACNA1EQ15878 2313 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 TTC28Q96AY4 2481 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 A0A0A6YYD5 115 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 CPED1A4D0V7 1026 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 MGRN1O60291 552 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 PRKRAO75569 313 aaKnown RBP11.85□□□□□ -0.51
CHMP3-204ENST00000409727 ANP32DO95626 131 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 CTSBP07858 339 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 FURINP09958 794 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 ME2P23368 584 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 WNT3P56703 355 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 SLAMF1Q13291 335 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 SELPLGQ14242 412 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 DPY19L1Q2PZI1 675 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 ADPRMQ3LIE5 342 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 SNAP47Q5SQN1 464 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 TCEAL6Q6IPX3 200 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 ZCCHC8Q6NZY4 707 aaKnown RBP11.85□□□□□ -0.51
CHMP3-204ENST00000409727 PRMT9Q6P2P2 845 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 PRR23CQ6ZRP0 262 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 KANSL1Q7Z3B3 1105 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 BMP8AQ7Z5Y6 402 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 IFNEQ86WN2 208 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 TICAM1Q8IUC6 712 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 EID2Q8N6I1 236 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 ACOT4Q8N9L9 421 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 CEP76Q8TAP6 659 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.85□□□□□ -0.51
CHMP3-204ENST00000409727 UCN3Q969E3 161 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 TCEAL3Q969E4 200 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 CCDC74AQ96AQ1 378 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 TM4SF18Q96CE8 201 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 AURKBQ96GD4 344 aaPredicted RBP11.85□□□□□ -0.51
CHMP3-204ENST00000409727 ITCHQ96J02 903 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 PANX1Q96RD7 426 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 CGREF1Q99674 301 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 PCDHAC1Q9H158 963 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 ARRDC1-AS1Q9H2J1 176 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 DDX31Q9H8H2 851 aaKnown RBP11.85□□□□□ -0.51
CHMP3-204ENST00000409727 SERHLQ9NQF3 203 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 PRDM7Q9NQW5 492 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 SOHLH2Q9NX45 425 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 TEX10Q9NXF1 929 aaPredicted RBP11.85□□□□□ -0.51
CHMP3-204ENST00000409727 FBXW2Q9UKT8 454 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 SLC6A14Q9UN76 642 aa11.85□□□□□ -0.51
CHMP3-204ENST00000409727 VPS13AQ96RL7 3174 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 CABIN1Q9Y6J0 2220 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 DMDP11532 3685 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 IGHV1OR21-1A0A087WYE8 117 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 GLOD5A6NK44 160 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 H0Y3Z8 333 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 ARHGAP33O14559 1287 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 RFXANKO14593 260 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 NVLO15381 856 aaKnown RBP11.84□□□□□ -0.51
CHMP3-204ENST00000409727 MAP3K7O43318 606 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 SIGLEC6O43699 453 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 FKBP9O95302 570 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 ATP6V1G2O95670 118 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 ABCB1P08183 1280 aaPredicted RBP11.84□□□□□ -0.51
CHMP3-204ENST00000409727 FAM58BPP0C7Q3 252 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 ALPPL2P10696 532 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 PCSK2P16519 638 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 HIST1H1TP22492 207 aaPredicted RBP11.84□□□□□ -0.51
CHMP3-204ENST00000409727 ATP5A1P25705 553 aaKnown RBP11.84□□□□□ -0.51
CHMP3-204ENST00000409727 HOXD12P35452 270 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 EPHA4P54764 986 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 C21orf58P58505 322 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 MS4A2Q01362 244 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 FOXM1Q08050 763 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 PRSS53Q2L4Q9 553 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 DEFB134Q4QY38 66 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 SAMD4BQ5PRF9 694 aaKnown RBP11.84□□□□□ -0.51
CHMP3-204ENST00000409727 RNF44Q7L0R7 432 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 R3HCC1LQ7Z5L2 792 aaKnown RBP11.84□□□□□ -0.51
CHMP3-204ENST00000409727 CSNK1A1LQ8N752 337 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 CAMKVQ8NCB2 501 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 OR8J2Q8NGG1 315 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 NT5CQ8TCD5 201 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 UTP15Q8TED0 518 aaKnown RBP11.84□□□□□ -0.51
CHMP3-204ENST00000409727 TMEM125Q96AQ2 219 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 TM4SF19Q96DZ7 209 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 DCBLD2Q96PD2 775 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 DUSP23Q9BVJ7 150 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 COPS7BQ9H9Q2 264 aaPredicted RBP11.84□□□□□ -0.51
CHMP3-204ENST00000409727 SLC25A37Q9NYZ2 338 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 TMEM9Q9P0T7 183 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 ADAM29Q9UKF5 820 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 PCDHB14Q9Y5E9 798 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 PCDHA9Q9Y5H5 950 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 KLK4Q9Y5K2 254 aa11.84□□□□□ -0.51
CHMP3-204ENST00000409727 IGHV5-51A0A0C4DH38 117 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms