RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 NAA10P41227 235 aaPredicted RBP8.12□□□□□ -1.11
SCN9A-203ENST00000409672 UGT8Q16880 541 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 SLC39A5Q6ZMH5 540 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 FANK1Q8TC84 345 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 HAPLN3Q96S86 360 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 MRPL15Q9P015 296 aaKnown RBP8.12□□□□□ -1.11
SCN9A-203ENST00000409672 NDUFA13Q9P0J0 144 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 VDAC3Q9Y277 283 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 CFL2Q9Y281 166 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 EN2P19622 333 aaPredicted RBP8.12□□□□□ -1.11
SCN9A-203ENST00000409672 CRHR1P34998 444 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 RIDAP52758 137 aaKnown RBP8.12□□□□□ -1.11
SCN9A-203ENST00000409672 MALLQ13021 153 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 SCAMP4Q969E2 229 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 SUCNR1Q9BXA5 334 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 DYNLRB1Q9NP97 96 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 TAS2R9Q9NYW1 312 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 PLLPQ9Y342 182 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 CDK5RAP2Q96SN8 1893 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 MYH1P12882 1939 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 CAPN8A6NHC0 703 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 FAM171A2A8MVW0 826 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 IFNA21P01568 189 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 GPR139Q6DWJ6 353 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 AVL9Q8NBF6 648 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 RDH12Q96NR8 316 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 CD180Q99467 661 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 RTKNQ9BST9 563 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 CLIC1O00299 241 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 ECI2O75521 394 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 SEMA4FO95754 770 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 GSTT1P30711 240 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 L1CAMP32004 1257 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 AGTR2P50052 363 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 AKAP14Q86UN6 197 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 C2orf15Q8WU43 125 aaKnown RBP8.12□□□□□ -1.11
SCN9A-203ENST00000409672 HNRNPABQ99729 332 aaKnown RBP8.12□□□□□ -1.11
SCN9A-203ENST00000409672 SP140LQ9H930 580 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 RSL24D1Q9UHA3 163 aaKnown RBP8.12□□□□□ -1.11
SCN9A-203ENST00000409672 RARRES3Q9UL19 164 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 PCDHGB7Q9Y5F8 929 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 COL6A2P12110 1019 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 BLMHQ13867 455 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 PIAS4Q8N2W9 510 aaPredicted RBP8.12□□□□□ -1.11
SCN9A-203ENST00000409672 CEP76Q8TAP6 659 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 SAR1AQ9NR31 198 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 ZNF221Q9UK13 617 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 ASCC3Q8N3C0 2202 aaKnown RBP8.12□□□□□ -1.11
SCN9A-203ENST00000409672 FXYD6-FXYD2A0A087WZ82 144 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 TMEM233B4DJY2 109 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 ITGA10O75578 1167 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 HTR1AP08908 422 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 POU2F2P09086 479 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 PNLIPRP1P54315 467 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 C22orf39Q6P5X5 142 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 TMIGD1Q6UXZ0 262 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 KIF18BQ86Y91 864 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 TMEM130Q8N3G9 435 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 KLHL36Q8N4N3 616 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 OR4D6Q8NGJ1 314 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 OR9A1PQ8NGU1 263 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 CD300LFQ8TDQ1 290 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 AGAP11Q8TF27 550 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 SLC5A11Q8WWX8 675 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 FXYD6Q9H0Q3 95 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 CICQ96RK0 1608 aaPredicted RBP8.12□□□□□ -1.11
SCN9A-203ENST00000409672 FBP2O00757 339 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 ARSAP15289 507 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 IL32P24001 234 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 ZNF33BQ06732 778 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 LCP2Q13094 533 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 SLX4IPQ5VYV7 408 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 PAQR7Q86WK9 346 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 ANKK1Q8NFD2 765 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 KCNN1Q92952 543 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 TMEM51Q9NW97 253 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 MEMO1Q9Y316 297 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 DUXAA6NLW8 204 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 AIREO43918 545 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 CCR3P51677 355 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 AFF1P51825 1210 aaKnown RBP8.12□□□□□ -1.11
SCN9A-203ENST00000409672 GDF10P55107 478 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 RCAN2Q14206 197 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 ZNF423Q2M1K9 1284 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 ZFP69Q49AA0 526 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 GPRC6AQ5T6X5 926 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 BRAT1Q6PJG6 821 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 Q6ZVL8 140 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 SCGB1C1Q8TD33 95 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 IL23AQ9NPF7 189 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 SPHK2Q9NRA0 654 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 OXSMQ9NWU1 459 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 SH2B3Q9UQQ2 575 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 ASB3Q9Y575 518 aa8.12□□□□□ -1.11
SCN9A-203ENST00000409672 ADAMTS3O15072 1205 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 CSTAP01040 98 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 GSTT2BP0CG30 244 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ARHGAP1Q07960 439 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 MERTKQ12866 999 aa8.11□□□□□ -1.11
SCN9A-203ENST00000409672 ILF2Q12905 390 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms