RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 ACPTQ9BZG2 426 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 C2orf42Q9NWW7 574 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 DUSP12Q9UNI6 340 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 NEU3Q9UQ49 428 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 CXCR6O00574 342 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 POLR1CO15160 346 aaPredicted RBP10.91□□□□□ -0.66
SNX13-202ENST00000409604 ALOX12P18054 663 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 AGXTP21549 392 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 GCKP35557 465 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 HK2P52789 917 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 EMX2Q04743 252 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 NEDD8Q15843 81 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 WLSQ5T9L3 541 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 PLEKHM3Q6ZWE6 761 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 OLIG3Q7RTU3 272 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 BNIPLQ7Z465 357 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 PLXDC1Q8IUK5 500 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 VPS35Q96QK1 796 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 ZNF607Q96SK3 696 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 HOPXQ9BPY8 73 aaPredicted RBP10.91□□□□□ -0.66
SNX13-202ENST00000409604 ZFYVE21Q9BQ24 234 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 RPF2Q9H7B2 306 aaKnown RBP10.91□□□□□ -0.66
SNX13-202ENST00000409604 GEMIN8Q9NWZ8 242 aaKnown RBP10.91□□□□□ -0.66
SNX13-202ENST00000409604 GPRC5BQ9NZH0 403 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 KLF11O14901 512 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 PCDHGA12O60330 932 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 FAM58BPP0C7Q3 252 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 OR12D1P0DN82 309 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 CD27P26842 260 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 NAA20P61599 178 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 RACK1P63244 317 aaKnown RBP10.9□□□□□ -0.66
SNX13-202ENST00000409604 BNC1Q01954 994 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 ZNF750Q32MQ0 723 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 PLAC1Q9HBJ0 212 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 TNFRSF12AQ9NP84 129 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 MKLN1Q9UL63 735 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 ZNF451Q9Y4E5 1061 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 PRSS51A0A1B0GVH4 220 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 TIA1P31483 386 aaKnown RBP eCLIP10.9□□□□□ -0.66
SNX13-202ENST00000409604 RAD23AP54725 363 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 GNA13Q14344 377 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 FAM214AQ32MH5 1076 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 KLHL12Q53G59 568 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.9□□□□□ -0.66
SNX13-202ENST00000409604 CGB2Q6NT52 195 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 TTLQ8NG68 377 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 FBXL8Q96CD0 374 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 TMEM121BQ9BXQ6 578 aaPredicted RBP10.9□□□□□ -0.66
SNX13-202ENST00000409604 LRMDAQ9H2I8 198 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 TM9SF3Q9HD45 589 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 PRTFDC1Q9NRG1 225 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 STOML2Q9UJZ1 356 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 POLR1DQ9Y2S0 133 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 E2F3O00716 465 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 PGM3O95394 542 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 RPLP0P05388 317 aaKnown RBP10.9□□□□□ -0.66
SNX13-202ENST00000409604 CEACAM5P06731 702 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 AHCYP23526 432 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 LIPJQ5W064 366 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 MIPOL1Q8TD10 442 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 SLC29A3Q9BZD2 475 aa10.9□□□□□ -0.66
SNX13-202ENST00000409604 ROS1P08922 2347 aa10.9□□□□□ -0.67
SNX13-202ENST00000409604 A0A1W2PP18 115 aa10.9□□□□□ -0.67
SNX13-202ENST00000409604 FAM47E-STBD1D6RA91 191 aa10.9□□□□□ -0.67
SNX13-202ENST00000409604 SOX30O94993 753 aa10.9□□□□□ -0.67
SNX13-202ENST00000409604 ETFAP13804 333 aa10.9□□□□□ -0.67
SNX13-202ENST00000409604 MTHFD2P13995 350 aa10.9□□□□□ -0.67
SNX13-202ENST00000409604 IL12BP29460 328 aa10.9□□□□□ -0.67
SNX13-202ENST00000409604 GFERP55789 205 aa10.9□□□□□ -0.67
SNX13-202ENST00000409604 KLC1Q07866 573 aa10.9□□□□□ -0.67
SNX13-202ENST00000409604 PYCR3Q53H96 274 aa10.9□□□□□ -0.67
SNX13-202ENST00000409604 TYW3Q6IPR3 259 aaKnown RBP10.9□□□□□ -0.67
SNX13-202ENST00000409604 TMEM64Q6YI46 380 aa10.9□□□□□ -0.67
SNX13-202ENST00000409604 TECPR1Q7Z6L1 1165 aa10.9□□□□□ -0.67
SNX13-202ENST00000409604 ARMC8Q8IUR7 673 aa10.9□□□□□ -0.67
SNX13-202ENST00000409604 OR4K14Q8NGD5 310 aa10.9□□□□□ -0.67
SNX13-202ENST00000409604 PDP1Q9P0J1 537 aaPredicted RBP10.9□□□□□ -0.67
SNX13-202ENST00000409604 RARRES3Q9UL19 164 aa10.9□□□□□ -0.67
SNX13-202ENST00000409604 NPIPA5A0A0B4J1W7 369 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 NPIPA7E9PJI5 369 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 ZNF821O75541 412 aaPredicted RBP10.89□□□□□ -0.67
SNX13-202ENST00000409604 HEXBP07686 556 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 ALOX5P09917 674 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 NPIPA8P0DM63 369 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 CAPN3P20807 821 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 SLC18A1P54219 525 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 TRIM25Q14258 630 aaKnown RBP10.89□□□□□ -0.67
SNX13-202ENST00000409604 PAGE3Q5JUK9 113 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 NANOGP8Q6NSW7 305 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 MCATQ8IVS2 390 aaKnown RBP10.89□□□□□ -0.67
SNX13-202ENST00000409604 IPCEF1Q8WWN9 437 aaPredicted RBP10.89□□□□□ -0.67
SNX13-202ENST00000409604 SLC25A36Q96CQ1 311 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 CHID1Q9BWS9 393 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 NANOGQ9H9S0 305 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 NAALAD2Q9Y3Q0 740 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 A0A1B0GTW7 788 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 A0A1W2PPC4 97 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 SLC25A12O75746 678 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 PEX2P28328 305 aa10.89□□□□□ -0.67
SNX13-202ENST00000409604 PRDX1Q06830 199 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms