RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 TCEAL8Q8IYN2 117 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 ANKK1Q8NFD2 765 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 VANGL1Q8TAA9 524 aaPredicted RBP14.84□□□□□ -0.03
LIMS2-205ENST00000409455 BHMTQ93088 406 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 DOHHQ9BU89 302 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 ATP13A2Q9NQ11 1180 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 RLIMQ9NVW2 624 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 MOSPD1Q9UJG1 213 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 MAPRE3Q9UPY8 281 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 PCDHGC4Q9Y5F7 938 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 SH3D21A4FU49 640 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 CARNS1A5YM72 827 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 ANKRD66B4E2M5 251 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 B8ZZF3 427 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 NOS1APO75052 506 aaPredicted RBP14.84□□□□□ -0.03
LIMS2-205ENST00000409455 STK16O75716 305 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 SCG5P05408 212 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 AQP1P29972 269 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 MTAPQ13126 283 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 ARHGEF7Q14155 803 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 TMEM240Q5SV17 173 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 PLAG1Q6DJT9 500 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 GDPGP1Q6ZNW5 385 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 CFAP52Q8N1V2 620 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 YIPF7Q8N8F6 280 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 OR52J3Q8NH60 311 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 OPALINQ96PE5 141 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 NIPSNAP1Q9BPW8 284 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 ZBP1Q9H171 429 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 SPEF1Q9Y4P9 236 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 INSL6Q9Y581 213 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 RAI2Q9Y5P3 530 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 INSL5Q9Y5Q6 135 aa14.84□□□□□ -0.03
LIMS2-205ENST00000409455 NUP214P35658 2090 aaPredicted RBP14.83□□□□□ -0.04
LIMS2-205ENST00000409455 IQCMA0A1B0GVH7 501 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 CTSAP10619 480 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 ZNF7P17097 686 aaPredicted RBP14.83□□□□□ -0.04
LIMS2-205ENST00000409455 PRPS1L1P21108 318 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 TACR2P21452 398 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 PSMA1P25786 263 aaKnown RBP14.83□□□□□ -0.04
LIMS2-205ENST00000409455 HLA-DMAP28067 261 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 HOXD9P28356 352 aaPredicted RBP14.83□□□□□ -0.04
LIMS2-205ENST00000409455 ALDH9A1P49189 494 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 SPIBQ01892 262 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 TMEM150AQ86TG1 271 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 DENND1CQ8IV53 801 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 LGI4Q8N135 537 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 SYNPOQ8N3V7 929 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 DEDD2Q8WXF8 326 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 CMTM7Q96FZ5 175 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 TRMT2BQ96GJ1 504 aaKnown RBP14.83□□□□□ -0.04
LIMS2-205ENST00000409455 MAP6Q96JE9 813 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 APOLD1Q96LR9 279 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 SPATA9Q9BWV2 254 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 FAM83DQ9H4H8 585 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.83□□□□□ -0.04
LIMS2-205ENST00000409455 NDUFAF4Q9P032 175 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 A0A0B4J293 547 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 POLR1CO15160 346 aaPredicted RBP14.83□□□□□ -0.04
LIMS2-205ENST00000409455 TGM5O43548 720 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 TMCC2O75069 709 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 PDE9AO76083 593 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 CCNB2O95067 398 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 CPSF4O95639 269 aaKnown RBP14.83□□□□□ -0.04
LIMS2-205ENST00000409455 KLKB1P03952 638 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 CSF2P04141 144 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 CCNYL3P0C7X3 344 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 SLC6A4P31645 630 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 SOX3P41225 446 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 GZMKP49863 264 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 EPHB3P54753 998 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 SRSF11Q05519 484 aaKnown RBP14.83□□□□□ -0.04
LIMS2-205ENST00000409455 TNK1Q13470 666 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 CERS6Q6ZMG9 384 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 SLC44A2Q8IWA5 706 aaPredicted RBP14.83□□□□□ -0.04
LIMS2-205ENST00000409455 CAMKK1Q8N5S9 505 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 OR7D4Q8NG98 312 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 CSGALNACT1Q8TDX6 532 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 CLP1Q92989 425 aaKnown RBP14.83□□□□□ -0.04
LIMS2-205ENST00000409455 RNF31Q96EP0 1072 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 HHIPQ96QV1 700 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 SPON2Q9BUD6 331 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 NIPAL2Q9H841 368 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 HHATLQ9HCP6 504 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 LATS2Q9NRM7 1088 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 CLN6Q9NWW5 311 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 SEC14L4Q9UDX3 406 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 TEKT2Q9UIF3 430 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 AP1M2Q9Y6Q5 423 aa14.83□□□□□ -0.04
LIMS2-205ENST00000409455 ZNF670-ZNF695F2Z2N8 137 aa14.82□□□□□ -0.04
LIMS2-205ENST00000409455 MPZL2O60487 215 aa14.82□□□□□ -0.04
LIMS2-205ENST00000409455 ACSL4O60488 711 aa14.82□□□□□ -0.04
LIMS2-205ENST00000409455 CXCL14O95715 111 aa14.82□□□□□ -0.04
LIMS2-205ENST00000409455 UBL4AP11441 157 aa14.82□□□□□ -0.04
LIMS2-205ENST00000409455 CDH12P55289 794 aa14.82□□□□□ -0.04
LIMS2-205ENST00000409455 PCDH1Q08174 1060 aa14.82□□□□□ -0.04
LIMS2-205ENST00000409455 MICAQ29983 383 aa14.82□□□□□ -0.04
LIMS2-205ENST00000409455 GLYR1Q49A26 553 aaPredicted RBP14.82□□□□□ -0.04
LIMS2-205ENST00000409455 ZNF648Q5T619 568 aaPredicted RBP14.82□□□□□ -0.04
LIMS2-205ENST00000409455 CCDC149Q6ZUS6 474 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms