RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 IGHV3-20A0A0C4DH32 117 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 A0A1W2PPM1 405 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 B3GALT2O43825 422 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 TGFB1P01137 390 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 SBK3P0C264 359 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 TAC1P20366 129 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 HSD17B3P37058 310 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 CASRP41180 1078 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 RHAGQ02094 409 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 DDX39BQ13838 428 aaKnown RBP16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 RUNX2Q13950 521 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 ABRAXAS2Q15018 415 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 PCOLCEQ15113 449 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 AGAP7PQ5VUJ5 663 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 ABHD17CQ6PCB6 329 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 CHSY3Q70JA7 882 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 ANKRD37Q7Z713 158 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 MZB1Q8WU39 189 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 AGAP4Q96P64 663 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 QRFPRQ96P65 431 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 TUBB6Q9BUF5 446 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 NPLQ9BXD5 320 aaPredicted RBP16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 MFRPQ9BY79 579 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 COPS7BQ9H9Q2 264 aaPredicted RBP16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 PCTPQ9UKL6 214 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 RNF11Q9Y3C5 154 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 PCDHGA11Q9Y5H2 935 aa16.9■□□□□ 0.3
PDLIM2-206ENST00000409141 A8MT66 165 aa16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 MAGEB17A8MXT2 336 aa16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 FAM227AF5H4B4 570 aa16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 UGDHO60701 494 aa16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 SH3BGRLO75368 114 aa16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 SEC24DO94855 1032 aaPredicted RBP16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 SERPINA7P05543 415 aa16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 ICAM2P13598 275 aa16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 KRT15P19012 456 aa16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 CPSF6Q16630 551 aaKnown RBP eCLIP16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 NADK2Q4G0N4 442 aa16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 TMEM35AQ53FP2 167 aa16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 WDR93Q6P2C0 686 aa16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 TDRPQ86YL5 185 aa16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 L3MBTL4Q8NA19 623 aa16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 SRFBP1Q8NEF9 429 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 TM9SF4Q92544 642 aa16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 REPS1Q96D71 796 aa16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 CMTM7Q96FZ5 175 aa16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 PTCHD1Q96NR3 888 aa16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 SERINC2Q96SA4 455 aa16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 MS4A8Q9BY19 250 aa16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 DCDC2Q9UHG0 476 aa16.89■□□□□ 0.29
PDLIM2-206ENST00000409141 FOXO6A8MYZ6 492 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 J3QKU1 62 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 OR7A17O14581 309 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 PRMT3O60678 531 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 CLDN9O95484 217 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 GSTA1P08263 222 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 PRR35P0CG20 571 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 PIK3CBP42338 1070 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 CCNG1P51959 295 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 MTTPP55157 894 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 BTG2P78543 158 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 ACTN3Q08043 901 aaPredicted RBP16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 IGFL3Q6UXB1 125 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 CYP4X1Q8N118 509 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 ZADH2Q8N4Q0 377 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 HUS1BQ8NHY5 278 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 EPS8L3Q8TE67 593 aaKnown RBP16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 TSLPQ969D9 159 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 IMMP1LQ96LU5 166 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 NSUN5Q96P11 429 aaKnown RBP16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 KCNC2Q96PR1 638 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 CDK15Q96Q40 435 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 MTERF1Q99551 399 aaKnown RBP16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 TBCDQ9BTW9 1192 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 ROGDIQ9GZN7 287 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 EPN3Q9H201 632 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 OR51B5Q9H339 312 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 ZBTB20Q9HC78 741 aaPredicted RBP16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 SEMA4BQ9NPR2 832 aaPredicted RBP16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 PRDM7Q9NQW5 492 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 NUP210LQ5VU65 1888 aa16.88■□□□□ 0.29
PDLIM2-206ENST00000409141 HELZ2Q9BYK8 2649 aaKnown RBP16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 H0YIV9 168 aa16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 CERS1P27544 350 aa16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 OR4D2P58180 307 aa16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 AP2B1P63010 937 aa16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 PHEXP78562 749 aa16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 TLE1Q04724 770 aa16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 ZRSR2Q15696 482 aaKnown RBP16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 ERCC6LQ2NKX8 1250 aa16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 AP5B1Q2VPB7 878 aa16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 SFT2D3Q587I9 215 aa16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 DEPDC1Q5TB30 811 aa16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 KHDRBS2Q5VWX1 349 aaKnown RBP16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 JMJD6Q6NYC1 403 aaPredicted RBP16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 RPS27LQ71UM5 84 aaKnown RBP16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 UBE3DQ7Z6J8 389 aa16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 RNF175Q8N4F7 328 aa16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 RBMXL3Q8N7X1 1067 aaKnown RBP16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 OR52B6Q8NGF0 335 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms