RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 DLGAP2Q9P1A6 1054 aa18.08■□□□□ 0.49
USP39-202ENST00000409025 BTN3A3O00478 584 aa18.08■□□□□ 0.48
USP39-202ENST00000409025 ACOX3O15254 700 aa18.08■□□□□ 0.48
USP39-202ENST00000409025 THEGLP0DJG4 465 aa18.08■□□□□ 0.48
USP39-202ENST00000409025 SSR2P43308 183 aa18.08■□□□□ 0.48
USP39-202ENST00000409025 CHN2P52757 468 aa18.08■□□□□ 0.48
USP39-202ENST00000409025 PLA2G16P53816 162 aa18.08■□□□□ 0.48
USP39-202ENST00000409025 TRA2BP62995 288 aaKnown RBP18.08■□□□□ 0.48
USP39-202ENST00000409025 VEZF1Q14119 521 aa18.08■□□□□ 0.48
USP39-202ENST00000409025 NKG7Q16617 165 aa18.08■□□□□ 0.48
USP39-202ENST00000409025 PRSS53Q2L4Q9 553 aa18.08■□□□□ 0.48
USP39-202ENST00000409025 ZNF425Q6IV72 752 aa18.08■□□□□ 0.48
USP39-202ENST00000409025 UGT2A3Q6UWM9 527 aa18.08■□□□□ 0.48
USP39-202ENST00000409025 FKBP9P1Q75LS8 142 aa18.08■□□□□ 0.48
USP39-202ENST00000409025 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.08■□□□□ 0.48
USP39-202ENST00000409025 MMP21Q8N119 569 aa18.08■□□□□ 0.48
USP39-202ENST00000409025 MFSD2AQ8NA29 543 aa18.08■□□□□ 0.48
USP39-202ENST00000409025 MFSD9Q8NBP5 474 aa18.08■□□□□ 0.48
USP39-202ENST00000409025 PYURFQ96I23 114 aa18.08■□□□□ 0.48
USP39-202ENST00000409025 FANCMQ8IYD8 2048 aa18.07■□□□□ 0.48
USP39-202ENST00000409025 SPTY2D1-AS1A0A0U1RR47 76 aa18.07■□□□□ 0.48
USP39-202ENST00000409025 A0A1W2PPC4 97 aa18.07■□□□□ 0.48
USP39-202ENST00000409025 ZNF23P17027 643 aa18.07■□□□□ 0.48
USP39-202ENST00000409025 ALDH9A1P49189 494 aa18.07■□□□□ 0.48
USP39-202ENST00000409025 GAS6Q14393 721 aa18.07■□□□□ 0.48
USP39-202ENST00000409025 KIR2DS3Q14952 304 aa18.07■□□□□ 0.48
USP39-202ENST00000409025 ADRM1Q16186 407 aa18.07■□□□□ 0.48
USP39-202ENST00000409025 LRRC23Q53EV4 343 aaPredicted RBP18.07■□□□□ 0.48
USP39-202ENST00000409025 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.07■□□□□ 0.48
USP39-202ENST00000409025 IYDQ6PHW0 289 aa18.07■□□□□ 0.48
USP39-202ENST00000409025 ANGPTL8Q6UXH0 198 aa18.07■□□□□ 0.48
USP39-202ENST00000409025 ZFPM2Q8WW38 1151 aa18.07■□□□□ 0.48
USP39-202ENST00000409025 C17orf62Q9BQA9 187 aa18.07■□□□□ 0.48
USP39-202ENST00000409025 DPH2Q9BQC3 489 aaPredicted RBP18.07■□□□□ 0.48
USP39-202ENST00000409025 TPSD1Q9BZJ3 242 aa18.07■□□□□ 0.48
USP39-202ENST00000409025 CHST8Q9H2A9 424 aa18.07■□□□□ 0.48
USP39-202ENST00000409025 DNAJB9Q9UBS3 223 aa18.07■□□□□ 0.48
USP39-202ENST00000409025 RPS6KA6Q9UK32 745 aa18.07■□□□□ 0.48
USP39-202ENST00000409025 PCDHGA2Q9Y5H1 932 aa18.07■□□□□ 0.48
USP39-202ENST00000409025 TMPRSS11DO60235 418 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 PRSS23O95084 383 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 VIPP01282 170 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 KDELR2P33947 212 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 MLLT1Q03111 559 aaPredicted RBP18.06■□□□□ 0.48
USP39-202ENST00000409025 EIF2B5Q13144 721 aaKnown RBP18.06■□□□□ 0.48
USP39-202ENST00000409025 FRMD1Q8N878 549 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 FAM174AQ8TBP5 190 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 RLN3Q8WXF3 142 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 RAD21L1Q9H4I0 556 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 LTB4R2Q9NPC1 389 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 ZNF639Q9UID6 485 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 KLHL20Q9Y2M5 609 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 PCDHGA4Q9Y5G9 962 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 A0A0A6YYD5 115 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 IGHV1OR15-9A0A0B4J2B8 117 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 ZW10O43264 779 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 ZNF682O95780 498 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 CST1P01037 141 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 HOXB3P14651 431 aaPredicted RBP18.06■□□□□ 0.48
USP39-202ENST00000409025 IL9P15248 144 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 CHI3L1P36222 383 aaPredicted RBP18.06■□□□□ 0.48
USP39-202ENST00000409025 CRATP43155 626 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 ARFIP1P53367 373 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 ADPRMQ3LIE5 342 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 PAQR7Q86WK9 346 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 NAGSQ8N159 534 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 OR52N2Q8NGI0 321 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 MS4A6EQ96DS6 147 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 KLHDC7BQ96G42 594 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 ZNF764Q96H86 408 aaPredicted RBP18.06■□□□□ 0.48
USP39-202ENST00000409025 TEFMQ96QE5 360 aaKnown RBP18.06■□□□□ 0.48
USP39-202ENST00000409025 AICDAQ9GZX7 198 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 TCEAL2Q9H3H9 227 aaPredicted RBP18.06■□□□□ 0.48
USP39-202ENST00000409025 KLHL31Q9H511 634 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 NTN4Q9HB63 628 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 GPR27Q9NS67 375 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 UBAP1Q9NZ09 502 aa18.06■□□□□ 0.48
USP39-202ENST00000409025 FAF1Q9UNN5 650 aaPredicted RBP18.06■□□□□ 0.48
USP39-202ENST00000409025 A0A0G2JN53 185 aa18.05■□□□□ 0.48
USP39-202ENST00000409025 EI24O14681 340 aa18.05■□□□□ 0.48
USP39-202ENST00000409025 PDPK1O15530 556 aa18.05■□□□□ 0.48
USP39-202ENST00000409025 SMNDC1O75940 238 aaKnown RBP eCLIP18.05■□□□□ 0.48
USP39-202ENST00000409025 KRT75O95678 551 aa18.05■□□□□ 0.48
USP39-202ENST00000409025 STATHP02808 62 aa18.05■□□□□ 0.48
USP39-202ENST00000409025 SOAT1P35610 550 aa18.05■□□□□ 0.48
USP39-202ENST00000409025 VAC14Q08AM6 782 aa18.05■□□□□ 0.48
USP39-202ENST00000409025 HYAL2Q12891 473 aa18.05■□□□□ 0.48
USP39-202ENST00000409025 FZD5Q13467 585 aa18.05■□□□□ 0.48
USP39-202ENST00000409025 GPR18Q14330 331 aa18.05■□□□□ 0.48
USP39-202ENST00000409025 FZD2Q14332 565 aa18.05■□□□□ 0.48
USP39-202ENST00000409025 ZNF542PQ5EBM4 170 aa18.05■□□□□ 0.48
USP39-202ENST00000409025 NHSL2Q5HYW2 709 aa18.05■□□□□ 0.48
USP39-202ENST00000409025 TOR1AIP1Q5JTV8 583 aa18.05■□□□□ 0.48
USP39-202ENST00000409025 FAM160A2Q8N612 972 aaPredicted RBP18.05■□□□□ 0.48
USP39-202ENST00000409025 SRFBP1Q8NEF9 429 aaKnown RBP18.05■□□□□ 0.48
USP39-202ENST00000409025 OR5P2Q8WZ92 322 aa18.05■□□□□ 0.48
USP39-202ENST00000409025 TMBIM1Q969X1 311 aa18.05■□□□□ 0.48
USP39-202ENST00000409025 SHDQ96IW2 340 aa18.05■□□□□ 0.48
USP39-202ENST00000409025 CDX2Q99626 313 aaPredicted RBP18.05■□□□□ 0.48
USP39-202ENST00000409025 POT1Q9NUX5 634 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms