RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 SEMA7AO75326 666 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 SUPT3HO75486 399 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 URI1O94763 535 aaPredicted RBP8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 SMIM10L1P0DMW3 83 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 TFEBP19484 476 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 EEF1DP29692 281 aaKnown RBP8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 KCNC1P48547 511 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 HSPA7P48741 367 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 SERPINB8P50452 374 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 PGGT1BP53609 377 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 MTTPP55157 894 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 RAB38P57729 211 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 GPX6P59796 221 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 OLR1P78380 273 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 MRPS25P82663 173 aaKnown RBP8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 OC90Q02509 493 aaPredicted RBP8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 EFTUD2Q15029 972 aaKnown RBP eCLIP8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 TMEM35AQ53FP2 167 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 ZNF766Q5HY98 468 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 RPS19BP1Q86WX3 136 aaKnown RBP8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 ZNF595Q8IYB9 648 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 CYP4X1Q8N118 509 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 BEST3Q8N1M1 668 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 CA13Q8N1Q1 262 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 CATSPER1Q8NEC5 780 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 OR2L5Q8NG80 312 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 OR5T3Q8NGG3 340 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 RHEBL1Q8TAI7 183 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 FBF1Q8TES7 1133 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 CREB3L4Q8TEY5 395 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 UBTD2Q8WUN7 234 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 EXT2Q93063 718 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 TSLPQ969D9 159 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 TMEM125Q96AQ2 219 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 REPS1Q96D71 796 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 WDR34Q96EX3 536 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 SMIM10Q96HG1 83 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 KCNC2Q96PR1 638 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 SERINC2Q96SA4 455 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 CCDC77Q9BR77 488 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 MESP1Q9BRJ9 268 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 TMEM79Q9BSE2 394 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 REXO4Q9GZR2 422 aaKnown RBP8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 SPNS1Q9H2V7 528 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 RHBGQ9H310 441 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 PLA2G3Q9NZ20 509 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 TMCO1Q9UM00 188 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 NTNG1Q9Y2I2 539 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 ANGPTL3Q9Y5C1 460 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 POLEQ07864 2286 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 SCN2AQ99250 2005 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 IGKV3D-11A0A0A0MRZ8 115 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 LRIT2A6NDA9 550 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 GABRR3A8MPY1 467 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 K7EPI3 171 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 DYRK3O43781 588 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 LDLRP01130 860 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 CELA2AP08217 269 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 INHBAP08476 426 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 SLC35E2BP0CK96 405 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 EPB42P16452 691 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 CASP2P42575 452 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 GDF5P43026 501 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 CYB561P49447 251 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 SERPINB9P50453 376 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 CLCN2P51788 898 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 BTN3A2P78410 334 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 HYAL2Q12891 473 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 SLC13A2Q13183 592 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 CHIT1Q13231 466 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 TUBA3CQ13748 450 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 DOC2AQ14183 400 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 OR4D1Q15615 310 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 OR1C1Q15619 314 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 ADPRMQ3LIE5 342 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 GLE1Q53GS7 698 aaKnown RBP8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 KRTCAP3Q53RY4 240 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 METTL2BQ6P1Q9 378 aaKnown RBP8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 MED27Q6P2C8 311 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 TUBA3EQ6PEY2 450 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 ZDHHC24Q6UX98 284 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 GFRALQ6UXV0 394 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 CHSY3Q70JA7 882 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 MAMDC2Q7Z304 686 aaPredicted RBP8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 CRLF3Q8IUI8 442 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 RELL1Q8IUW5 271 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 EID3Q8N140 333 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 POGLUT1Q8NBL1 392 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 ELP5Q8TE02 316 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 MS4A6EQ96DS6 147 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 VMP1Q96GC9 406 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 C16orf45Q96MC5 204 aaPredicted RBP8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 TBCDQ9BTW9 1192 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 DEFB126Q9BYW3 111 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 CD244Q9BZW8 370 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 ALG9Q9H6U8 611 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 ADAP2Q9NPF8 381 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 PRTFDC1Q9NRG1 225 aa8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 RYDENQ9NUL5 291 aaKnown RBP8.52□□□□□ -1.05
SNORD88A-201ENST00000408314 ERRFI1Q9UJM3 462 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms