RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 TBC1D19Q8N5T2 526 aa7.94□□□□□ -1.14
GPC3-203ENST00000406757 METTL27Q8N6F8 245 aaPredicted RBP7.94□□□□□ -1.14
GPC3-203ENST00000406757 C1orf52Q8N6N3 182 aaKnown RBP7.94□□□□□ -1.14
GPC3-203ENST00000406757 ZNF655Q8N720 491 aaPredicted RBP7.94□□□□□ -1.14
GPC3-203ENST00000406757 CSNK1A1LQ8N752 337 aa7.94□□□□□ -1.14
GPC3-203ENST00000406757 OR1L3Q8NH93 324 aa7.94□□□□□ -1.14
GPC3-203ENST00000406757 BCAS4Q8TDM0 211 aa7.94□□□□□ -1.14
GPC3-203ENST00000406757 NUDT8Q8WV74 236 aa7.94□□□□□ -1.14
GPC3-203ENST00000406757 SNRNP27Q8WVK2 155 aaKnown RBP7.94□□□□□ -1.14
GPC3-203ENST00000406757 RERGQ96A58 199 aaPredicted RBP7.94□□□□□ -1.14
GPC3-203ENST00000406757 TM4SF19Q96DZ7 209 aa7.94□□□□□ -1.14
GPC3-203ENST00000406757 MAGEB10Q96LZ2 347 aaPredicted RBP7.94□□□□□ -1.14
GPC3-203ENST00000406757 OR6C1Q96RD1 312 aa7.94□□□□□ -1.14
GPC3-203ENST00000406757 MS4A8Q9BY19 250 aa7.94□□□□□ -1.14
GPC3-203ENST00000406757 FAM117AQ9C073 453 aa7.94□□□□□ -1.14
GPC3-203ENST00000406757 NSRP1Q9H0G5 558 aaKnown RBP7.94□□□□□ -1.14
GPC3-203ENST00000406757 MEAF6Q9HAF1 191 aa7.94□□□□□ -1.14
GPC3-203ENST00000406757 APMAPQ9HDC9 416 aa7.94□□□□□ -1.14
GPC3-203ENST00000406757 SEMA5BQ9P283 1151 aa7.94□□□□□ -1.14
GPC3-203ENST00000406757 KLHL14Q9P2G3 628 aa7.94□□□□□ -1.14
GPC3-203ENST00000406757 PDP2Q9P2J9 529 aa7.94□□□□□ -1.14
GPC3-203ENST00000406757 PLCL2Q9UPR0 1127 aa7.94□□□□□ -1.14
GPC3-203ENST00000406757 POLR3HQ9Y535 204 aaPredicted RBP7.94□□□□□ -1.14
GPC3-203ENST00000406757 KLK4Q9Y5K2 254 aa7.94□□□□□ -1.14
GPC3-203ENST00000406757 FLNBO75369 2602 aaKnown RBP7.94□□□□□ -1.14
GPC3-203ENST00000406757 BOD1L1Q8NFC6 3051 aa7.94□□□□□ -1.14
GPC3-203ENST00000406757 MDC1Q14676 2089 aaKnown RBP7.93□□□□□ -1.14
GPC3-203ENST00000406757 LRIT2A6NDA9 550 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 ZNF860A6NHJ4 632 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 FOXE1O00358 373 aaPredicted RBP7.93□□□□□ -1.14
GPC3-203ENST00000406757 NDUFAB1O14561 156 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 LSM1O15116 133 aaKnown RBP7.93□□□□□ -1.14
GPC3-203ENST00000406757 ERI3O43414 337 aaKnown RBP7.93□□□□□ -1.14
GPC3-203ENST00000406757 SLC28A2O43868 658 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 EEDO75530 441 aaKnown RBP7.93□□□□□ -1.14
GPC3-203ENST00000406757 CLEC3AO75596 197 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 FAM107AO95990 144 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 KLK1P06870 262 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 CD1EP15812 388 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 ITIH1P19827 911 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 NCF2P19878 526 aaPredicted RBP7.93□□□□□ -1.14
GPC3-203ENST00000406757 PTX3P26022 381 aaPredicted RBP7.93□□□□□ -1.14
GPC3-203ENST00000406757 CSTF2P33240 577 aaKnown RBP eCLIP7.93□□□□□ -1.141e-7■■■■■ 35.2
GPC3-203ENST00000406757 AHRP35869 848 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 ETV5P41161 510 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 PIK3CBP42338 1070 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 GCGRP47871 477 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 RAP1GDS1P52306 607 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 MAPK10P53779 464 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 RPL38P63173 70 aaKnown RBP7.93□□□□□ -1.14
GPC3-203ENST00000406757 OLR1P78380 273 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 RAE1P78406 368 aaKnown RBP7.93□□□□□ -1.14
GPC3-203ENST00000406757 BTN3A2P78410 334 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 PHEXP78562 749 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 TBL3Q12788 808 aaKnown RBP7.93□□□□□ -1.14
GPC3-203ENST00000406757 CSTF3Q12996 717 aaKnown RBP7.93□□□□□ -1.14
GPC3-203ENST00000406757 TUBB3Q13509 450 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 TUBB8Q3ZCM7 444 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 XKR7Q5GH72 579 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 C6orf136Q5SQH8 315 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 DEPDC1Q5TB30 811 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 KHDRBS2Q5VWX1 349 aaKnown RBP7.93□□□□□ -1.14
GPC3-203ENST00000406757 ACAD11Q709F0 780 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 LARP4Q71RC2 724 aaKnown RBP eCLIP7.93□□□□□ -1.14
GPC3-203ENST00000406757 TRPV3Q8NET8 790 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 CLHC1Q8NHS4 586 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 CDC26Q8NHZ8 85 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 WDR36Q8NI36 951 aaKnown RBP7.93□□□□□ -1.14
GPC3-203ENST00000406757 NT5CQ8TCD5 201 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 UTP15Q8TED0 518 aaKnown RBP7.93□□□□□ -1.14
GPC3-203ENST00000406757 CHTF18Q8WVB6 975 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 UCN3Q969E3 161 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 PMEPA1Q969W9 287 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 ZNF501Q96CX3 271 aaPredicted RBP7.93□□□□□ -1.14
GPC3-203ENST00000406757 MS4A6EQ96DS6 147 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 CMTM7Q96FZ5 175 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 SEC16BQ96JE7 1060 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 CATSPER2Q96P56 530 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 SERPINI1Q99574 410 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 C17orf62Q9BQA9 187 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 SARGQ9BW04 601 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 REXO4Q9GZR2 422 aaKnown RBP7.93□□□□□ -1.14
GPC3-203ENST00000406757 CLMPQ9H6B4 373 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 LRTM1Q9HBL6 345 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 TCF7L2Q9NQB0 619 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 FGF21Q9NSA1 209 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 RIC8BQ9NVN3 520 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 HEY2Q9UBP5 337 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 VPS29Q9UBQ0 182 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 BAIAP2L1Q9UHR4 511 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 RUVBL1Q9Y265 456 aaKnown RBP7.93□□□□□ -1.14
GPC3-203ENST00000406757 SCN3AQ9NY46 2000 aa7.93□□□□□ -1.14
GPC3-203ENST00000406757 CCDC187A0A096LP49 1063 aa7.92□□□□□ -1.14
GPC3-203ENST00000406757 A0A0A6YYC8 382 aaPredicted RBP7.92□□□□□ -1.14
GPC3-203ENST00000406757 SERTM1A2A2V5 107 aa7.92□□□□□ -1.14
GPC3-203ENST00000406757 HYKKA2RU49 373 aa7.92□□□□□ -1.14
GPC3-203ENST00000406757 C9JVG2 144 aa7.92□□□□□ -1.14
GPC3-203ENST00000406757 I3L1I5 382 aaPredicted RBP7.92□□□□□ -1.14
GPC3-203ENST00000406757 SGK494L7N484 410 aa7.92□□□□□ -1.14
GPC3-203ENST00000406757 PLPP1O14494 284 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms