RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 HES7Q9BYE0 225 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 RAB17Q9H0T7 212 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 RHBGQ9H310 441 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 EHD1Q9H4M9 534 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 CNOT10Q9H9A5 744 aaKnown RBP14.41□□□□□ -0.1
TPM1-207ENST00000403994 PRDM9Q9NQV7 894 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 GPRC5BQ9NZH0 403 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 PCDHGB6Q9Y5F9 930 aa14.41□□□□□ -0.1
TPM1-207ENST00000403994 A0A0G2JN53 185 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 GABRR3A8MPY1 467 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 FAM227AF5H4B4 570 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 PRAMEF4O60810 478 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 FAM155BO75949 473 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 TBX6O95947 436 aaPredicted RBP14.4□□□□□ -0.1
TPM1-207ENST00000403994 SLC35E2BP0CK96 405 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 MYBL2P10244 700 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 STX2P32856 288 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 SRSF11Q05519 484 aaKnown RBP14.4□□□□□ -0.1
TPM1-207ENST00000403994 TRADDQ15628 312 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 PDK4Q16654 411 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 PRAMEF9Q5VWM5 478 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 SULT1C3Q6IMI6 304 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 ADNP2Q6IQ32 1131 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 GFRALQ6UXV0 394 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 CMC1Q7Z7K0 106 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 FJX1Q86VR8 437 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 SCUBE1Q8IWY4 988 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 CYP4X1Q8N118 509 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 KRT78Q8N1N4 520 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 SNX31Q8N9S9 440 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 DNAJB8Q8NHS0 232 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 KIAA1191Q96A73 305 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 MS4A6EQ96DS6 147 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 SEC16BQ96JE7 1060 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 UTP23Q9BRU9 249 aaKnown RBP14.4□□□□□ -0.1
TPM1-207ENST00000403994 PITHD1Q9GZP4 211 aaPredicted RBP14.4□□□□□ -0.1
TPM1-207ENST00000403994 NECTIN3Q9NQS3 549 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 RNF112Q9ULX5 631 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 ASB1Q9Y576 335 aa14.4□□□□□ -0.1
TPM1-207ENST00000403994 FBN2P35556 2912 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 LRIT2A6NDA9 550 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 ZG16O60844 167 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 H2AFYO75367 372 aaKnown RBP14.39□□□□□ -0.11
TPM1-207ENST00000403994 CLEC3AO75596 197 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 STK16O75716 305 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 UNC5CO95185 931 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 EPORP19235 508 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 CD22P20273 847 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 SPRP35270 261 aaPredicted RBP14.39□□□□□ -0.11
TPM1-207ENST00000403994 DCTP40126 519 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 CD96P40200 585 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 MAGEA4P43358 317 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 BTN3A2P78410 334 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 ADPRMQ3LIE5 342 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 ZNF787Q6DD87 383 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 PPM1NQ8N819 430 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 ESAMQ96AP7 390 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 WDR34Q96EX3 536 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 PTCD3Q96EY7 689 aaKnown RBP14.39□□□□□ -0.11
TPM1-207ENST00000403994 SCMH1Q96GD3 660 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 FAR2Q96K12 515 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 QRFPRQ96P65 431 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 CAPS2Q9BXY5 557 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 ALG9Q9H6U8 611 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 NT5DC2Q9H857 520 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 KLHL1Q9NR64 748 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 CD274Q9NZQ7 290 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 PTBP2Q9UKA9 531 aaKnown RBP14.39□□□□□ -0.11
TPM1-207ENST00000403994 MMACHCQ9Y4U1 282 aa14.39□□□□□ -0.11
TPM1-207ENST00000403994 CSMD1Q96PZ7 3565 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 MYO7BQ6PIF6 2116 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 ESYT3A0FGR9 886 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 TGFBR3LH3BV60 316 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 CLGNO14967 610 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 NEURL1O76050 574 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 S100BP04271 92 aaPredicted RBP14.38□□□□□ -0.11
TPM1-207ENST00000403994 CERS1P27544 350 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 TPP2P29144 1249 aaPredicted RBP14.38□□□□□ -0.11
TPM1-207ENST00000403994 HNRNPFP52597 415 aaKnown RBP14.38□□□□□ -0.11
TPM1-207ENST00000403994 PLA2G16P53816 162 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 DLG1Q12959 904 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 NAB1Q13506 487 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 RUNX2Q13950 521 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 DOC2AQ14183 400 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 TERF2Q15554 542 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 ZRSR2Q15696 482 aaKnown RBP14.38□□□□□ -0.11
TPM1-207ENST00000403994 XKR6Q5GH73 641 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 GRTP1Q5TC63 336 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 ZNF468Q5VIY5 522 aaPredicted RBP14.38□□□□□ -0.11
TPM1-207ENST00000403994 LRRC70Q7Z2Q7 622 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 FAM47BQ8NA70 645 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 TMEM52Q8NDY8 209 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 ARMC2Q8NEN0 867 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 NFAM1Q8NET5 270 aaPredicted RBP14.38□□□□□ -0.11
TPM1-207ENST00000403994 OR2L5Q8NG80 312 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 ADAMTS18Q8TE60 1221 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 FBF1Q8TES7 1133 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 UBTD2Q8WUN7 234 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 FRMD6Q96NE9 622 aa14.38□□□□□ -0.11
TPM1-207ENST00000403994 EFCAB11Q9BUY7 163 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms