RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 PITPNBP48739 271 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 TNFSF10P50591 281 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 CLCN4P51793 760 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 ARF5P84085 180 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 CNTN1Q12860 1018 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 SRSF9Q13242 221 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 GPR50Q13585 617 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 GIT2Q14161 759 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 EFTUD2Q15029 972 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 STXBP2Q15833 593 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 FAM189A2Q15884 450 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 FAM106AQ4KMX7 169 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 SPANXN4Q5MJ08 99 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 PRAMEF7Q5VXH5 474 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 CES4AQ5XG92 561 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 ETFRF1Q6IPR1 90 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 TATDN1Q6P1N9 297 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 DND1Q8IYX4 353 aaKnown RBP3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 ZNF619Q8N2I2 560 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 ADAD2Q8NCV1 583 aaKnown RBP3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 DDHD1Q8NEL9 900 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 RPLP0P6Q8NHW5 317 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 FAM76AQ8TAV0 307 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 UBTD2Q8WUN7 234 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 DNASE2BQ8WZ79 361 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 CCDC47Q96A33 483 aaKnown RBP3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 OMA1Q96E52 524 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 FBXO17Q96EF6 278 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 ZNF274Q96GC6 653 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 GMPPAQ96IJ6 420 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 ABCG4Q9H172 646 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 ABCG8Q9H221 673 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 CARD9Q9H257 536 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 DPEP3Q9H4B8 488 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 DCLRE1BQ9H816 532 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 KCNMB3Q9NPA1 279 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 TRMT6Q9UJA5 497 aaKnown RBP3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 EXOC7Q9UPT5 735 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 GAB2Q9UQC2 676 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 OR1A2Q9Y585 309 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 C2orf92A0A1B0GVN3 265 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 SH3PXD2BA1X283 911 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 GTPBP10A4D1E9 387 aaKnown RBP3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 KRT87PA6NCN2 255 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 C15orf61A6NNL5 157 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 LMO7DNF2Z398 122 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 SLC1A7O00341 560 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 IKBKBO14920 756 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 SYT7O43581 403 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 KRT33AO76009 404 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 CEBPBP17676 345 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 BACE1P56817 501 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 HUNKP57058 714 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 EVCP57679 992 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 SRP54P61011 504 aaKnown RBP3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 GUCY2DQ02846 1103 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 GRB14Q14449 540 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 PDK1Q15118 436 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 SPHARQ15513 63 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 TEAD2Q15562 447 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 CCDC92Q53HC0 331 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 C9orf50Q5SZB4 431 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 ZNF776Q68DI1 518 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 MACC1Q6ZN28 852 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 ZSCAN30Q86W11 494 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 WDR49Q8IV35 697 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 RNF149Q8NC42 400 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 CCNYQ8ND76 341 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 OR2T6Q8NHC8 308 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 C11orf45Q8TAV5 145 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 MAPK15Q8TD08 544 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 ZNRF4Q8WWF5 429 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 PRCCQ92733 491 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 CASP10Q92851 521 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 MRPL53Q96EL3 112 aaKnown RBP3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 CNRIP1Q96F85 164 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 ERGIC2Q96RQ1 377 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 RUFY1Q96T51 708 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 PCDHB18PQ96TA0 734 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 IL12RB2Q99665 862 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 LRRC2Q9BYS8 371 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 WWTR1Q9GZV5 400 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 SYTL2Q9HCH5 934 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 ANO10Q9NW15 660 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 COMMD8Q9NX08 183 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 FOXA2Q9Y261 457 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 NUDCQ9Y266 331 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 STRAPQ9Y3F4 350 aaKnown RBP3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 SELENOKQ9Y6D0 94 aa3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 DHX29Q7Z478 1369 aaKnown RBP3.35□□□□□ -1.87
HMGB1P17-201ENST00000403495 NOTCH4Q99466 2003 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 MACROD2A1Z1Q3 448 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 MEIOCA2RUB1 952 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 EME2A4GXA9 379 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 A8MU76 341 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 NPIPB9F8W1W9 429 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 TLX2O43763 284 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 ZG16O60844 167 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 CLN5O75503 358 aa3.34□□□□□ -1.87
HMGB1P17-201ENST00000403495 RPLP0P05388 317 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms