RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 MAGEB18Q96M61 343 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 ELOVL6Q9H5J4 265 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 LANCL2Q9NS86 450 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 VPS29Q9UBQ0 182 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 TCFL5Q9UL49 500 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 DAPP1Q9UN19 280 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 RNF11Q9Y3C5 154 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 SMIM23A6NLE4 172 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 UBFD1O14562 309 aaKnown RBP7.12□□□□□ -1.27
USP16-204ENST00000399976 CASC3O15234 703 aaKnown RBP7.12□□□□□ -1.27
USP16-204ENST00000399976 RGS14O43566 566 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 CREG1O75629 220 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 SASH3O75995 380 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 MMP11P24347 488 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 NAGLUP54802 743 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 RRADP55042 308 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 WDR4P57081 412 aaKnown RBP7.12□□□□□ -1.27
USP16-204ENST00000399976 OCRLQ01968 901 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 VAC14Q08AM6 782 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 SPRED3Q2MJR0 410 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 HHATQ5VTY9 493 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 RIPOR1Q6ZS17 1223 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 ADCK2Q7Z695 626 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 UBE3DQ7Z6J8 389 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 ZFAND4Q86XD8 727 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 SPACA3Q8IXA5 215 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 SLC38A9Q8NBW4 561 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 EXT2Q93063 718 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 MAELQ96JY0 434 aaKnown RBP7.12□□□□□ -1.27
USP16-204ENST00000399976 PPP3R2Q96LZ3 170 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 ILKAPQ9H0C8 392 aaPredicted RBP7.12□□□□□ -1.27
USP16-204ENST00000399976 ZNF700Q9H0M5 742 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 MYNNQ9NPC7 610 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 KCMF1Q9P0J7 381 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 TSR3Q9UJK0 312 aaKnown RBP7.12□□□□□ -1.27
USP16-204ENST00000399976 HPP00738 406 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 HMOX2P30519 316 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 FOLR3P41439 243 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 PPM1FP49593 454 aaPredicted RBP7.11□□□□□ -1.27
USP16-204ENST00000399976 TNFRSF17Q02223 184 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 OCA2Q04671 838 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 MPP2Q14168 576 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 RBBP5Q15291 538 aaKnown RBP7.11□□□□□ -1.27
USP16-204ENST00000399976 HKDC1Q2TB90 917 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 CAMKMTQ7Z624 323 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 PDSS2Q86YH6 399 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 OR8K3Q8NH51 312 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.11□□□□□ -1.278e-6■□□□□ 10.5
USP16-204ENST00000399976 PMEPA1Q969W9 287 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 ATP6V1E2Q96A05 226 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 GPN2Q9H9Y4 310 aaPredicted RBP7.11□□□□□ -1.27
USP16-204ENST00000399976 MEAF6Q9HAF1 191 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 RIC8BQ9NVN3 520 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 IFT80Q9P2H3 777 aaPredicted RBP7.11□□□□□ -1.27
USP16-204ENST00000399976 CROTQ9UKG9 612 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 PCDHGA9Q9Y5G4 932 aaKnown RBP7.11□□□□□ -1.27
USP16-204ENST00000399976 KNL1Q8NG31 2342 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 TNRC6AQ8NDV7 1962 aaKnown RBP7.11□□□□□ -1.27
USP16-204ENST00000399976 LOC101059948A0A1B0GTJ6 334 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 FEZF1A0PJY2 475 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 TRPC5OSA6NMA1 111 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 PLPP1O14494 284 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 LYPLA1O75608 230 aaPredicted RBP7.11□□□□□ -1.27
USP16-204ENST00000399976 OR4F21O95013 312 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 MED26O95402 600 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 FHP07954 510 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 ZNF888P0CJ79 500 aaPredicted RBP7.11□□□□□ -1.27
USP16-204ENST00000399976 ICAM2P13598 275 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 DLSTP36957 453 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 GMPRP36959 345 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 MAGEA8P43361 318 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 ASMTP46597 345 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 YBX1P67809 324 aaKnown RBP7.11□□□□□ -1.27
USP16-204ENST00000399976 RHAGQ02094 409 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 LRRC74AQ0VAA2 488 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 CDC20Q12834 499 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 STX3Q13277 289 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 MLC1Q15049 377 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 AP5B1Q2VPB7 878 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 CCDC157Q569K6 752 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 ARHGAP40Q5TG30 622 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 C2orf73Q8N5S3 287 aaPredicted RBP7.11□□□□□ -1.27
USP16-204ENST00000399976 TMEM102Q8N9M5 508 aaPredicted RBP7.11□□□□□ -1.27
USP16-204ENST00000399976 CCDC63Q8NA47 563 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 METTL6Q8TCB7 284 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 CKAP2Q8WWK9 683 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 TBC1D20Q96BZ9 403 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 NSUN5Q96P11 429 aaKnown RBP7.11□□□□□ -1.27
USP16-204ENST00000399976 SORT1Q99523 831 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 SLC7A5P2Q9GIP4 190 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 MID1IP1Q9NPA3 183 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 SEMA4BQ9NPR2 832 aaPredicted RBP7.11□□□□□ -1.27
USP16-204ENST00000399976 C5AR2Q9P296 337 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 TRAF6Q9Y4K3 522 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 EXPH5Q8NEV8 1989 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 TCRBV16S1A1N1A0A5B0 115 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 PMS2P1A4D2B8 440 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 TTC36A6NLP5 189 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 TAF4O00268 1085 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 CYR61O00622 381 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms