RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 C10orf62Q5T681 223 aaPredicted RBP11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 RNF165Q6ZSG1 346 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 KDF1Q8NAX2 398 aaPredicted RBP11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ZNF248Q8NDW4 579 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 OR2T11Q8NH01 316 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 RAB3IL1Q8TBN0 382 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SREK1Q8WXA9 508 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ZCCHC14Q8WYQ9 949 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ZNF75CPQ92670 426 aaPredicted RBP11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 DPH2Q9BQC3 489 aaPredicted RBP11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MRPL1Q9BYD6 325 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 BRF2Q9HAW0 419 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ANKHQ9HCJ1 492 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ZNF304Q9HCX3 659 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 HCN3Q9P1Z3 774 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 FIS1Q9Y3D6 152 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TRAF6Q9Y4K3 522 aa11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MRPS18BQ9Y676 258 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB1-203ENST00000399082 NUP210LQ5VU65 1888 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 VSTM2BA6NLU5 285 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TMPRSS11DO60235 418 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ULK1O75385 1050 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 JRKO75564 520 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 KLF7O75840 302 aaPredicted RBP11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SEMA3DO95025 777 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 HSPA4LO95757 839 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 HSD3B1P14060 373 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TCN2P20062 427 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 FBLP22087 321 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ATP5A1P25705 553 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 PTX3P26022 381 aaPredicted RBP11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 HSD3B2P26439 372 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CERS1P27544 350 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 RPS18P62269 152 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 FOXK2Q01167 660 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ZNF33BQ06732 778 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 NCF4Q15080 339 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 NKG7Q16617 165 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ARHGAP40Q5TG30 622 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TRIM40Q6P9F5 258 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 Q6ZSR9 355 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ABHD13Q7L211 337 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 OVCH1Q7RTY7 1134 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TRIM46Q7Z4K8 759 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ZC3H7AQ8IWR0 971 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SPACA3Q8IXA5 215 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CLYBLQ8N0X4 340 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CA13Q8N1Q1 262 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 METTL4Q8N3J2 472 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ENDOVQ8N8Q3 282 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TWIST2Q8WVJ9 160 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 KCNE4Q8WWG9 221 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CKAP2Q8WWK9 683 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 FKBP10Q96AY3 582 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 C11orf24Q96F05 449 aaPredicted RBP11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SERPINI1Q99574 410 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SPSB2Q99619 263 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SLC26A1Q9H2B4 701 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MANSC1Q9H8J5 431 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 EML4Q9HC35 981 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SLCO1B3Q9NPD5 702 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 INTS9Q9NV88 658 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 PNPOQ9NVS9 261 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 IFT80Q9P2H3 777 aaPredicted RBP11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SLC12A4Q9UP95 1085 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 BOLA1Q9Y3E2 137 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 RAP2CQ9Y3L5 183 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ACACBO00763 2458 aa11.74□□□□□ -0.53
HLA-DQB1-203ENST00000399082 A0A0A6YYD5 115 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 URADA6NGE7 173 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 C21orf140B9A014 251 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 NPIPB8E9PQR5 432 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 PIP5K1BO14986 540 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 KLK10O43240 276 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CHST10O43529 356 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 URB1O60287 2271 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 UMODP07911 640 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 RAB40ALP0C0E4 278 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CCNYL3P0C7X3 344 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 NEFHP12036 1026 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 AGXTP21549 392 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 HIST1H1TP22492 207 aaPredicted RBP11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TPP2P29144 1249 aaPredicted RBP11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 DLSTP36957 453 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 AVPR1BP47901 424 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 HNRNPFP52597 415 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 RAE1P78406 368 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 PHEXP78562 749 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 HSP90B2PQ58FF3 399 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 VWA2Q5GFL6 755 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 XKR7Q5GH72 579 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 OR4C11Q6IEV9 310 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MRM1Q6IN84 353 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CHSY3Q70JA7 882 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 COMMD6Q7Z4G1 85 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TRIM42Q8IWZ5 723 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 IL22RA1Q8N6P7 574 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 GBP7Q8N8V2 638 aaPredicted RBP11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ACOT4Q8N9L9 421 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CHTF18Q8WVB6 975 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms