RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 BTN3A2P78410 334 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 ACER2Q5QJU3 275 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 H3F3CQ6NXT2 135 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 QSOX2Q6ZRP7 698 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 TBC1D1Q86TI0 1168 aaPredicted RBP12.6□□□□□ -0.39
VCX3A-202ENST00000398729 SNX31Q8N9S9 440 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 PDPRQ8NCN5 879 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 STAG3L4Q8TBR4 150 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 EXT2Q93063 718 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 GAL3ST3Q96A11 431 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 ESAMQ96AP7 390 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 FAR2Q96K12 515 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 C16orf45Q96MC5 204 aaPredicted RBP12.6□□□□□ -0.39
VCX3A-202ENST00000398729 PTCHD1Q96NR3 888 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 EHD1Q9H4M9 534 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 KLHL31Q9H511 634 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 NT5DC2Q9H857 520 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 ABI3Q9P2A4 366 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 COPG2Q9UBF2 871 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 CROCCQ5TZA2 2017 aa12.6□□□□□ -0.39
VCX3A-202ENST00000398729 ZGRF1Q86YA3 2104 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 A0A088AWK7 358 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 ESYT3A0FGR9 886 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 E2F3O00716 465 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 ERI3O43414 337 aaKnown RBP12.59□□□□□ -0.39
VCX3A-202ENST00000398729 CLEC3AO75596 197 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 URI1O94763 535 aaPredicted RBP12.59□□□□□ -0.39
VCX3A-202ENST00000398729 ZNF10P21506 573 aaPredicted RBP12.59□□□□□ -0.39
VCX3A-202ENST00000398729 CRABP2P29373 138 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 SLC26A5P58743 744 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 TAS2R50P59544 299 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 GUCY2DQ02846 1103 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 EFTUD2Q15029 972 aaKnown RBP eCLIP12.59□□□□□ -0.39
VCX3A-202ENST00000398729 PDK4Q16654 411 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 MEP1AQ16819 746 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 FBXO48Q5FWF7 155 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 XKR6Q5GH73 641 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 FCRLBQ6BAA4 426 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 CMC1Q7Z7K0 106 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 CYP4X1Q8N118 509 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 SLC5A8Q8N695 610 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 ARMC2Q8NEN0 867 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 PTCD3Q96EY7 689 aaKnown RBP12.59□□□□□ -0.39
VCX3A-202ENST00000398729 PHF12Q96QT6 1004 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 SLX1AQ9BQ83 275 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 LRRC1Q9BTT6 524 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 AICDAQ9GZX7 198 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 RHBGQ9H310 441 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 ALG9Q9H6U8 611 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 NMRAL1Q9HBL8 299 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 PRDM9Q9NQV7 894 aa12.59□□□□□ -0.39
VCX3A-202ENST00000398729 PTBP2Q9UKA9 531 aaKnown RBP12.59□□□□□ -0.39
VCX3A-202ENST00000398729 LRIT2A6NDA9 550 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 C4orf51C9J302 202 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 CCNT2O60583 730 aaKnown RBP12.58□□□□□ -0.4
VCX3A-202ENST00000398729 PRAMEF2O60811 474 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 RASAL1O95294 804 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 LTA4HP09960 611 aaKnown RBP12.58□□□□□ -0.4
VCX3A-202ENST00000398729 SLC35E2BP0CK96 405 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 TFEBP19484 476 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 BTG2P78543 158 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 LAPTM5Q13571 262 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 WHAMMP3Q1A5X7 153 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 PAGE2BQ5JRK9 111 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 CEP128Q6ZU80 1094 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 LRRC70Q7Z2Q7 622 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 CCDC91Q7Z6B0 441 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 ISCA2Q86U28 154 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 CRLF3Q8IUI8 442 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 SLC34A3Q8N130 599 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 BEST3Q8N1M1 668 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 CA13Q8N1Q1 262 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 MS4A6EQ96DS6 147 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 WDR34Q96EX3 536 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 TAAR6Q96RI8 345 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 EFCAB11Q9BUY7 163 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 NPLQ9BXD5 320 aaPredicted RBP12.58□□□□□ -0.4
VCX3A-202ENST00000398729 CD244Q9BZW8 370 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 REXO4Q9GZR2 422 aaKnown RBP12.58□□□□□ -0.4
VCX3A-202ENST00000398729 ZDHHC18Q9NUE0 388 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 NUDT4Q9NZJ9 180 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 ACOT9Q9Y305 439 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 MMACHCQ9Y4U1 282 aa12.58□□□□□ -0.4
VCX3A-202ENST00000398729 PKDREJQ9NTG1 2253 aa12.57□□□□□ -0.4
VCX3A-202ENST00000398729 A0A0G2JN53 185 aa12.57□□□□□ -0.4
VCX3A-202ENST00000398729 TCRBV16S1A1N1A0A5B0 115 aa12.57□□□□□ -0.4
VCX3A-202ENST00000398729 SUPT3HB4E1H0 165 aa12.57□□□□□ -0.4
VCX3A-202ENST00000398729 FAM227AF5H4B4 570 aa12.57□□□□□ -0.4
VCX3A-202ENST00000398729 B3GALT2O43825 422 aa12.57□□□□□ -0.4
VCX3A-202ENST00000398729 KERAO60938 352 aa12.57□□□□□ -0.4
VCX3A-202ENST00000398729 SUPT3HO75486 399 aa12.57□□□□□ -0.4
VCX3A-202ENST00000398729 CRYABP02511 175 aaKnown RBP12.57□□□□□ -0.4
VCX3A-202ENST00000398729 MAOAP21397 527 aa12.57□□□□□ -0.4
VCX3A-202ENST00000398729 HNRNPH1P31943 449 aaKnown RBP12.57□□□□□ -0.4
VCX3A-202ENST00000398729 PHBP35232 272 aa12.57□□□□□ -0.4
VCX3A-202ENST00000398729 GMPRP36959 345 aa12.57□□□□□ -0.4
VCX3A-202ENST00000398729 KCNC1P48547 511 aa12.57□□□□□ -0.4
VCX3A-202ENST00000398729 PLA2G16P53816 162 aa12.57□□□□□ -0.4
VCX3A-202ENST00000398729 IRF8Q02556 426 aa12.57□□□□□ -0.4
VCX3A-202ENST00000398729 TGM3Q08188 693 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms