RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 HTR2BP41595 481 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 CSTF1Q05048 431 aaKnown RBP10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 BTBD16Q32M84 506 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ATAD3CQ5T2N8 411 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 PPP2R2DQ66LE6 453 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 RAET1GQ6H3X3 334 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 FAM92BQ6ZTR7 304 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 CHST9Q7L1S5 443 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 C16orf62Q7Z3J2 963 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SLC46A3Q7Z3Q1 461 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 MRPL10Q7Z7H8 261 aaKnown RBP10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ZFP41Q8N8Y5 198 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 DTX3Q8N9I9 347 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 UFD1Q92890 307 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 PIP5K1AQ99755 562 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 A0A1W2PQ09 198 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SMAD6O43541 496 aaKnown RBP10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 KCNK5O95279 499 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 TSPAN12O95859 305 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ELFN1P0C7U0 828 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 IL7P13232 177 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 NOS3P29474 1203 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SLC11A1P49279 550 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 STK19P49842 368 aaPredicted RBP10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SELENOWP63302 87 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 PTGES3Q15185 160 aaKnown RBP10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 LRRC26Q2I0M4 334 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SPIN4Q56A73 249 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ATAT1Q5SQI0 421 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 BICRALQ6AI39 1079 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 KIAA1161Q6NSJ0 714 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 Q6ZVL8 140 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 MARCH9Q86YJ5 346 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ELMOD2Q8IZ81 293 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 GHDCQ8N2G8 530 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ZNF671Q8TAW3 534 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 TP53INP1Q96A56 240 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 AP2M1Q96CW1 435 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 YIPF4Q9BSR8 244 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 TMED9Q9BVK6 235 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ZCCHC2Q9C0B9 1178 aaKnown RBP10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 PSORS1C1Q9UIG5 152 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 C2orf78A6NCI8 922 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 J3KTA2 159 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 QSOX1O00391 747 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 AXIN1O15169 862 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 MRPS14O60783 128 aaKnown RBP10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 IFITM3Q01628 133 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 LRIT3Q3SXY7 679 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 RTP2Q5QGT7 225 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ZNF730Q6ZMV8 503 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 GDPD3Q7L5L3 318 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 OR8H3Q8N146 312 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 FKBP10Q96AY3 582 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 PDLIM5Q96HC4 596 aaKnown RBP10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 FCRL4Q96PJ5 515 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 B4GALT6Q9UBX8 382 aa10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 CDV3Q9UKY7 258 aaKnown RBP10.69□□□□□ -0.7
CSGALNACT1-202ENST00000397998 A0A1W2PQL4 384 aaPredicted RBP10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SLC35F4A4IF30 521 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 MANSC4A6NHS7 340 aaPredicted RBP10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 CENPBD1B2RD01 187 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 NEDD8-MDP1E9PL57 170 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 PQBP1O60828 265 aaKnown RBP10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 PRLP01236 227 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 GPR1P46091 355 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 NRIP1P48552 1158 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 PRKCDQ05655 676 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ZNF630Q2M218 657 aaPredicted RBP10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 IDNKQ5T6J7 187 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 LINC00299Q6ZSB3 139 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 LIMS2Q7Z4I7 341 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 APCDD1Q8J025 514 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 CADM2Q8N3J6 435 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 MFSD4AQ8N468 514 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 DCAF4L2Q8NA75 395 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 YIPF6Q96EC8 236 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 PAWRQ96IZ0 340 aaKnown RBP10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 WRAP53Q9BUR4 548 aaKnown RBP10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SLIRPQ9GZT3 109 aaKnown RBP10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 NLKQ9UBE8 527 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 N6AMT1Q9Y5N5 214 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 COL4A5P29400 1685 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 IGLV3-10A0A075B6K4 115 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ZNF840PA6NDX5 716 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ZSCAN5BA6NJL1 495 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ISM1B1AKI9 464 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 E7EQ34 232 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 PCDH17O14917 1159 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 POP4O95707 220 aaKnown RBP10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ACLYP53396 1101 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 ZNF763Q0D2J5 394 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 VEZF1Q14119 521 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 MICAQ29983 383 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 MPPE1Q53F39 396 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 C1QTNF12Q5T7M4 302 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 SERPINA13PQ6UXR4 307 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 Q6ZVU0 165 aa10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 METTL3Q86U44 580 aaKnown RBP10.68□□□□□ -0.7
CSGALNACT1-202ENST00000397998 TIGD4Q8IY51 512 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 229.8 ms