RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 PLCL2Q9UPR0 1127 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 LOC400499M0QZD8 3231 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 IGHV5-10-1A0A0J9YXX1 117 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 A8MU76 341 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 D6RAR5 112 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 RTCAO00442 366 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 SRPX2O60687 465 aaPredicted RBP16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 MYO1DO94832 1006 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 SMIM10L1P0DMW3 83 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 CDK4P11802 303 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 NELFEP18615 380 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 TPP2P29144 1249 aaPredicted RBP16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 ZFP36L2P47974 494 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 NME5P56597 212 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 UFM1P61960 85 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 KCNAB1Q14722 419 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 PTGR1Q14914 329 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 RPS6KA2Q15349 733 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 ABHD17CQ6PCB6 329 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 PAOXQ6QHF9 649 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 FUNDC1Q8IVP5 155 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 SLITRK4Q8IW52 837 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 CACTIN-AS1Q8N1I8 211 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 ARHGEF39Q8N4T4 335 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 ZNF655Q8N720 491 aaPredicted RBP16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 CSNK1A1LQ8N752 337 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 PROKR1Q8TCW9 393 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 SMIM10Q96HG1 83 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 TEX37Q96LM6 180 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 TEFMQ96QE5 360 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 C17orf62Q9BQA9 187 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 PRDM7Q9NQW5 492 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 BAIAP2L1Q9UHR4 511 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 MCM8Q9UJA3 840 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 ADAM29Q9UKF5 820 aa16.1■□□□□ 0.17
TSPAN4-205ENST00000397406 A0A0G2JN53 185 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 A0A1W2PNU3 283 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 ZSCAN9O15535 394 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 ERI3O43414 337 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 EEDO75530 441 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 MT-CO3P00414 261 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 GBAP04062 536 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 EIF2S1P05198 315 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 KLK1P06870 262 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 ANXA4P09525 319 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 MSL3P1P0C860 447 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 T-ENOLP0DO92 83 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 JAK1P23458 1154 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 IL12AP29459 219 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 PLA2G16P53816 162 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 RTP5Q14D33 572 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 COL28A1Q2UY09 1125 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 PRTGQ2VWP7 1150 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 AGKQ53H12 422 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 OR4C11Q6IEV9 310 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 TMEM214Q6NUQ4 689 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 TRIM40Q6P9F5 258 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 ZNF793Q6ZN11 406 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 SRFBP1Q8NEF9 429 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 UTP15Q8TED0 518 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 EGLN2Q96KS0 407 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 CCDC74BQ96LY2 380 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 TMEM74Q96NL1 305 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 TSSK3Q96PN8 268 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 KCNC2Q96PR1 638 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 DDX31Q9H8H2 851 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 ENAMQ9NRM1 1142 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 CCDC167Q9P0B6 97 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 LHX6Q9UPM6 363 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 CLCA2Q9UQC9 943 aa16.09■□□□□ 0.17
TSPAN4-205ENST00000397406 SPTBP11277 2137 aa16.08■□□□□ 0.17
TSPAN4-205ENST00000397406 KNTC1P50748 2209 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 URADA6NGE7 173 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 H3BMH7 237 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 MAP3K7O43318 606 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 SLC22A3O75751 556 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 CBX6O95503 412 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 ZNF888P0CJ79 500 aaPredicted RBP16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 PCSK2P16519 638 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 PRDX6P30041 224 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 SSR2P43308 183 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 TSFMP43897 325 aaKnown RBP16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 ARL4DP49703 201 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 CLDN8P56748 225 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 RAB8AP61006 207 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 ZNF763Q0D2J5 394 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 BNIP1Q12981 228 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 SPIDRQ14159 915 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 HERC3Q15034 1050 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 WASHC2DQ5SRD0 308 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 RIPOR1Q6ZS17 1223 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 GK5Q6ZS86 529 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 PAGE2Q7Z2X7 111 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 NUDT13Q86X67 352 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 FAM9CQ8IZT9 166 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 AMER3Q8N944 861 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 CLHC1Q8NHS4 586 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 QRFPRQ96P65 431 aa16.08■□□□□ 0.16
TSPAN4-205ENST00000397406 TBCDQ9BTW9 1192 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms