RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 CLCN7P51798 805 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 SESN2P58004 480 aaPredicted RBP8.75□□□□□ -1.01
NEDD9-203ENST00000397378 GPR85P60893 370 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 CRADDP78560 199 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 TBX2Q13207 712 aaPredicted RBP8.75□□□□□ -1.01
NEDD9-203ENST00000397378 TTLL9Q3SXZ7 439 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 RTL6Q6ICC9 239 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 KIAA0930Q6ICG6 404 aaPredicted RBP8.75□□□□□ -1.01
NEDD9-203ENST00000397378 NIPAL1Q6NVV3 410 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 MDGA2Q7Z553 956 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 CYP4X1Q8N118 509 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 TMEM156Q8N614 296 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 OTUD6BQ8N6M0 293 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 RELL2Q8NC24 303 aaPredicted RBP8.75□□□□□ -1.01
NEDD9-203ENST00000397378 APCDD1LQ8NCL9 501 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 LINC01560Q8TB33 94 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 PTCHD1Q96NR3 888 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 SMC6Q96SB8 1091 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 PIP5K1AQ99755 562 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 C19orf24Q9BVV8 132 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 CLK4Q9HAZ1 481 aaKnown RBP8.75□□□□□ -1.01
NEDD9-203ENST00000397378 TIMMDC1Q9NPL8 285 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 CCDC177Q9NQR7 707 aaPredicted RBP8.75□□□□□ -1.01
NEDD9-203ENST00000397378 ALKBH4Q9NXW9 302 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 ADGRE2Q9UHX3 823 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 CRYL1Q9Y2S2 319 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 DUSP10Q9Y6W6 482 aa8.75□□□□□ -1.01
NEDD9-203ENST00000397378 A0A1B0GVC2 190 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 A0A1W2PPR1 153 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 GRID2IPA4D2P6 1211 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 MBD3L4A6NDZ8 208 aaPredicted RBP8.74□□□□□ -1.01
NEDD9-203ENST00000397378 MBD3L5A6NJ08 208 aaPredicted RBP8.74□□□□□ -1.01
NEDD9-203ENST00000397378 MIF4GDA9UHW6 222 aaKnown RBP8.74□□□□□ -1.01
NEDD9-203ENST00000397378 ACOT7O00154 380 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 AP3B1O00203 1094 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 SLC16A5O15375 505 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 LIASO43766 372 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 WDR1O75083 606 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 ITGA10O75578 1167 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 IFNB1P01574 187 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 IGHG3P01860 377 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 HRGP04196 525 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 ENO3P13929 434 aaPredicted RBP8.74□□□□□ -1.01
NEDD9-203ENST00000397378 ALOX12P18054 663 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 OGNP20774 298 aaKnown RBP8.74□□□□□ -1.01
NEDD9-203ENST00000397378 BMP5P22003 454 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 GRK3P35626 688 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 CYLC1P35663 651 aaPredicted RBP8.74□□□□□ -1.01
NEDD9-203ENST00000397378 NPY2RP49146 381 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 CLCN2P51788 898 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 NAP1L1P55209 391 aaKnown RBP8.74□□□□□ -1.01
NEDD9-203ENST00000397378 TBPL1P62380 186 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 PPIAP62937 165 aaKnown RBP8.74□□□□□ -1.01
NEDD9-203ENST00000397378 KRTAP1-1Q07627 177 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 PWP1Q13610 501 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 TERF2Q15554 542 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 C1orf185Q5T7R7 199 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 HEPHL1Q6MZM0 1159 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 CYHR1Q6ZMK1 362 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 C17orf64Q86WR6 236 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 HIPK1Q86Z02 1210 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 CILP2Q8IUL8 1156 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 GPALPP1Q8IXQ4 340 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 UBL4BQ8N7F7 174 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 PRELID2Q8N945 189 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 TC2NQ8N9U0 490 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 MFSD9Q8NBP5 474 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 PSD4Q8NDX1 1056 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 ZNF740Q8NDX6 193 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 B3GNT7Q8NFL0 401 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 GIMAP7Q8NHV1 300 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 ATG4AQ8WYN0 398 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 MFSD3Q96ES6 412 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 SLC30A3Q99726 388 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 KIFC1Q9BW19 673 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 FRMD8P1Q9BZ68 369 aaPredicted RBP8.74□□□□□ -1.01
NEDD9-203ENST00000397378 AMBRA1Q9C0C7 1298 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 PRDM9Q9NQV7 894 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 EIF2B3Q9NR50 452 aaKnown RBP8.74□□□□□ -1.01
NEDD9-203ENST00000397378 DEPPQ9NTK1 212 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 BFARQ9NZS9 450 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 PAK5Q9P286 719 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 FOXD3Q9UJU5 478 aaPredicted RBP8.74□□□□□ -1.01
NEDD9-203ENST00000397378 AMFRQ9UKV5 643 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 PPIEQ9UNP9 301 aaKnown RBP8.74□□□□□ -1.01
NEDD9-203ENST00000397378 DRG1Q9Y295 367 aaKnown RBP8.74□□□□□ -1.01
NEDD9-203ENST00000397378 VPS9D1Q9Y2B5 631 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 YARS2Q9Y2Z4 477 aaKnown RBP8.74□□□□□ -1.01
NEDD9-203ENST00000397378 ANK2Q01484 3957 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 DOCK7Q96N67 2140 aa8.74□□□□□ -1.01
NEDD9-203ENST00000397378 TRBV11-1A0A0K0K1C0 115 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 PINLYPA6NC86 204 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 FAM166BA8MTA8 275 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 GOLGA8KD6RF30 607 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 GOLGA8TH3BQL2 631 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 DVL2O14641 736 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 SUSD5O60279 629 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 B4GALT2O60909 372 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 GLSO94925 669 aaPredicted RBP8.73□□□□□ -1.01
NEDD9-203ENST00000397378 TP53P04637 393 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms