RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 SVILO95425 2214 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 NUP210LQ5VU65 1888 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 K7EPI3 171 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 CLGNO14967 610 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 HCRTR1O43613 425 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 COX6B1P14854 86 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 EPB42P16452 691 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 TSPAN8P19075 237 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 CAPN3P20807 821 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 AGAP20933 346 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 CCND1P24385 295 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 GRK2P25098 689 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 HTR1EP28566 365 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 PIK3CGP48736 1102 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 ARSFP54793 590 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 CDH13P55290 713 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 NAA20P61599 178 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 TBPL1P62380 186 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 GTF2H2Q13888 395 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 PCBP2Q15366 365 aaKnown RBP eCLIP12.96□□□□□ -0.333e-9■■■■■ 55.9
SEC13-205ENST00000397101 ZIC1Q15915 447 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 PDK4Q16654 411 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 UNC50Q53HI1 259 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 GTF2H2CQ6P1K8 395 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 XKRXQ6PP77 449 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 KIRREL2Q6UWL6 708 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 RPS27LQ71UM5 84 aaKnown RBP12.96□□□□□ -0.33
SEC13-205ENST00000397101 OVCH1Q7RTY7 1134 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 LRRC70Q7Z2Q7 622 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 GOLGA7Q7Z5G4 137 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 MRGPRGQ86SM5 289 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 THOC6Q86W42 341 aaKnown RBP12.96□□□□□ -0.33
SEC13-205ENST00000397101 DNAJC22Q8N4W6 341 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 ZNF655Q8N720 491 aaPredicted RBP12.96□□□□□ -0.33
SEC13-205ENST00000397101 TRPC4APQ8TEL6 797 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 UBTD2Q8WUN7 234 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 ZNF75CPQ92670 426 aaPredicted RBP12.96□□□□□ -0.33
SEC13-205ENST00000397101 L3HYPDHQ96EM0 354 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 CCDC120Q96HB5 630 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 CNDP1Q96KN2 507 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 OR2A14Q96R47 310 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 SPSB2Q99619 263 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 NRTNQ99748 197 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 ACAT2Q9BWD1 397 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 CAPS2Q9BXY5 557 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 KLHL25Q9H0H3 589 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 EML4Q9HC35 981 aaKnown RBP12.96□□□□□ -0.33
SEC13-205ENST00000397101 SEMA4BQ9NPR2 832 aaPredicted RBP12.96□□□□□ -0.33
SEC13-205ENST00000397101 OR6C2Q9NZP2 312 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 PLCL2Q9UPR0 1127 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 HS3ST3B1Q9Y662 390 aa12.96□□□□□ -0.33
SEC13-205ENST00000397101 PKDREJQ9NTG1 2253 aa12.96□□□□□ -0.34
SEC13-205ENST00000397101 CCDC168Q8NDH2 2452 aa12.96□□□□□ -0.34
SEC13-205ENST00000397101 DOCK10Q96BY6 2186 aa12.96□□□□□ -0.34
SEC13-205ENST00000397101 CCDC88CQ9P219 2028 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 A0A0J9YY10 115 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 TMEM114B3SHH9 223 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 E7ENX8 843 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 NPHS1O60500 1241 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 CRCPO75575 148 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 VIMP08670 466 aaKnown RBP12.95□□□□□ -0.34
SEC13-205ENST00000397101 UGT2B7P16662 529 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 SSTR2P30874 369 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 GGT5P36269 586 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 SLC1A6P48664 564 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 CCNG1P51959 295 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 ABCE1P61221 599 aaKnown RBP12.95□□□□□ -0.34
SEC13-205ENST00000397101 GNGT1P63211 74 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 TAP2Q03519 686 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 CLCQ05315 142 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 RCN2Q14257 317 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 SF1Q15637 639 aaKnown RBP12.95□□□□□ -0.34
SEC13-205ENST00000397101 TUBB8Q3ZCM7 444 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 VWA2Q5GFL6 755 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 YOD1Q5VVQ6 348 aaPredicted RBP12.95□□□□□ -0.34
SEC13-205ENST00000397101 MYLK4Q86YV6 388 aaPredicted RBP12.95□□□□□ -0.34
SEC13-205ENST00000397101 OR56A3Q8NH54 315 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 FLVCR1-AS1Q8TAF5 88 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 RAB3IL1Q8TBN0 382 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 SLC22A18Q96BI1 424 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 NSUN5Q96P11 429 aaKnown RBP12.95□□□□□ -0.34
SEC13-205ENST00000397101 MIPEPQ99797 713 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 SHCBP1LQ9BZQ2 653 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 PCBD2Q9H0N5 130 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 NOL11Q9H8H0 719 aaKnown RBP12.95□□□□□ -0.34
SEC13-205ENST00000397101 IPPKQ9H8X2 491 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 SEMA3GQ9NS98 782 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 TAC3Q9UHF0 121 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 PCTPQ9UKL6 214 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 KCNE2Q9Y6J6 123 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 MYO7BQ6PIF6 2116 aa12.95□□□□□ -0.34
SEC13-205ENST00000397101 MED13LQ71F56 2210 aa12.94□□□□□ -0.34
SEC13-205ENST00000397101 A0A1B0GX78 115 aa12.94□□□□□ -0.34
SEC13-205ENST00000397101 CCNDBP1O95273 360 aa12.94□□□□□ -0.34
SEC13-205ENST00000397101 MLYCDO95822 493 aa12.94□□□□□ -0.34
SEC13-205ENST00000397101 RPS17P08708 135 aaKnown RBP12.94□□□□□ -0.34
SEC13-205ENST00000397101 CHRM5P08912 532 aaPredicted RBP12.94□□□□□ -0.34
SEC13-205ENST00000397101 SERPINB5P36952 375 aa12.94□□□□□ -0.34
SEC13-205ENST00000397101 CA7P43166 264 aa12.94□□□□□ -0.34
SEC13-205ENST00000397101 SLC6A12P48065 614 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms