RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 CD22P20273 847 aa16.87■□□□□ 0.29
CXCL12-204ENST00000395793 MLF1P58340 268 aa16.87■□□□□ 0.29
CXCL12-204ENST00000395793 TAS2R50P59544 299 aa16.87■□□□□ 0.29
CXCL12-204ENST00000395793 BTN3A2P78410 334 aa16.87■□□□□ 0.29
CXCL12-204ENST00000395793 OC90Q02509 493 aaPredicted RBP16.87■□□□□ 0.29
CXCL12-204ENST00000395793 ZKSCAN8Q15776 578 aaPredicted RBP16.87■□□□□ 0.29
CXCL12-204ENST00000395793 TMIGD1Q6UXZ0 262 aa16.87■□□□□ 0.29
CXCL12-204ENST00000395793 SIAH3Q8IW03 269 aa16.87■□□□□ 0.29
CXCL12-204ENST00000395793 SPATA4Q8NEY3 305 aa16.87■□□□□ 0.29
CXCL12-204ENST00000395793 WWOXQ9NZC7 414 aa16.87■□□□□ 0.29
CXCL12-204ENST00000395793 LRFN1Q9P244 771 aa16.87■□□□□ 0.29
CXCL12-204ENST00000395793 ZNF223Q9UK11 482 aaPredicted RBP16.87■□□□□ 0.29
CXCL12-204ENST00000395793 ASB1Q9Y576 335 aa16.87■□□□□ 0.29
CXCL12-204ENST00000395793 GTF3C1Q12789 2109 aa16.87■□□□□ 0.29
CXCL12-204ENST00000395793 LRIT2A6NDA9 550 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 PSMD12O00232 456 aaPredicted RBP16.86■□□□□ 0.29
CXCL12-204ENST00000395793 CCL21O00585 134 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 ZNHIT1O43257 154 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 ERI3O43414 337 aaKnown RBP16.86■□□□□ 0.29
CXCL12-204ENST00000395793 SP1P08047 785 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 MYBL2P10244 700 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 PRF1P14222 555 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 CD46P15529 392 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 GRNP28799 593 aaKnown RBP16.86■□□□□ 0.29
CXCL12-204ENST00000395793 EEF1DP29692 281 aaKnown RBP16.86■□□□□ 0.29
CXCL12-204ENST00000395793 PPP2R1BP30154 601 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 GGT5P36269 586 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 HSPA7P48741 367 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 SLC12A2P55011 1212 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 STXBP1P61764 594 aaKnown RBP16.86■□□□□ 0.29
CXCL12-204ENST00000395793 C3AR1Q16581 482 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 ADPRMQ3LIE5 342 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 RNFT1Q5M7Z0 435 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.86■□□□□ 0.29
CXCL12-204ENST00000395793 TICAM1Q8IUC6 712 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 SCUBE1Q8IWY4 988 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 C17orf53Q8N3J3 647 aaPredicted RBP16.86■□□□□ 0.29
CXCL12-204ENST00000395793 APCDD1LQ8NCL9 501 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 BBOF1Q8ND07 529 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 CCT6BQ92526 530 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 GPR137Q96N19 417 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 CPNE1Q99829 537 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 DNAJC11Q9NVH1 559 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 ENTPD4Q9Y227 616 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 CREBBPQ92793 2442 aa16.86■□□□□ 0.29
CXCL12-204ENST00000395793 ARHGAP10A1A4S6 786 aa16.85■□□□□ 0.29
CXCL12-204ENST00000395793 PRSS44E7EML9 344 aa16.85■□□□□ 0.29
CXCL12-204ENST00000395793 EIF3HO15372 352 aaKnown RBP eCLIP16.85■□□□□ 0.29
CXCL12-204ENST00000395793 SLC19A2O60779 497 aa16.85■□□□□ 0.29
CXCL12-204ENST00000395793 H2AFYO75367 372 aaKnown RBP16.85■□□□□ 0.29
CXCL12-204ENST00000395793 FAM155BO75949 473 aa16.85■□□□□ 0.29
CXCL12-204ENST00000395793 GP5P40197 560 aa16.85■□□□□ 0.29
CXCL12-204ENST00000395793 KCNC1P48547 511 aa16.85■□□□□ 0.29
CXCL12-204ENST00000395793 DLG1Q12959 904 aa16.85■□□□□ 0.29
CXCL12-204ENST00000395793 CALCOCO2Q13137 446 aa16.85■□□□□ 0.29
CXCL12-204ENST00000395793 TRADDQ15628 312 aa16.85■□□□□ 0.29
CXCL12-204ENST00000395793 SLC25A25Q6KCM7 469 aa16.85■□□□□ 0.29
CXCL12-204ENST00000395793 GPSM1Q86YR5 675 aa16.85■□□□□ 0.29
CXCL12-204ENST00000395793 CHERPQ8IWX8 916 aaKnown RBP16.85■□□□□ 0.29
CXCL12-204ENST00000395793 ARMC10Q8N2F6 343 aa16.85■□□□□ 0.29
CXCL12-204ENST00000395793 TMEM178AQ8NBL3 297 aa16.85■□□□□ 0.29
CXCL12-204ENST00000395793 TSPAN17Q96FV3 270 aa16.85■□□□□ 0.29
CXCL12-204ENST00000395793 UBXN10Q96LJ8 280 aa16.85■□□□□ 0.29
CXCL12-204ENST00000395793 NT5DC2Q9H857 520 aa16.85■□□□□ 0.29
CXCL12-204ENST00000395793 TRIM45Q9H8W5 580 aaPredicted RBP16.85■□□□□ 0.29
CXCL12-204ENST00000395793 GPRC5BQ9NZH0 403 aa16.85■□□□□ 0.29
CXCL12-204ENST00000395793 TINAGQ9UJW2 476 aa16.85■□□□□ 0.29
CXCL12-204ENST00000395793 ZNF490Q9ULM2 529 aaPredicted RBP16.85■□□□□ 0.29
CXCL12-204ENST00000395793 MMACHCQ9Y4U1 282 aa16.85■□□□□ 0.29
CXCL12-204ENST00000395793 LRBAP50851 2863 aa16.85■□□□□ 0.29
CXCL12-204ENST00000395793 TRBV11-1A0A0K0K1C0 115 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 NPIPA5E9PKD4 350 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 NME2P1O60361 137 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 CLEC3AO75596 197 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 SLC25A12O75746 678 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 MYO1DO94832 1006 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 STMN1P16949 149 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 NME2P22392 152 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 CERS1P27544 350 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 RAB38P57729 211 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 ADORA2A-AS1P86434 159 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 ALDH6A1Q02252 535 aaKnown RBP16.84■□□□□ 0.29
CXCL12-204ENST00000395793 DOC2AQ14183 400 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 SP5Q6BEB4 398 aaPredicted RBP16.84■□□□□ 0.29
CXCL12-204ENST00000395793 CMC1Q7Z7K0 106 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 TCAIMQ8N3R3 496 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 CPSF7Q8N684 471 aaKnown RBP16.84■□□□□ 0.29
CXCL12-204ENST00000395793 FAM47BQ8NA70 645 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 PDPRQ8NCN5 879 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 B3GNT7Q8NFL0 401 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 TTLQ8NG68 377 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 THAP3Q8WTV1 239 aaPredicted RBP16.84■□□□□ 0.29
CXCL12-204ENST00000395793 CDKL2Q92772 493 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 WDR34Q96EX3 536 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 CSF3RQ99062 836 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 EHD1Q9H4M9 534 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 PTBP2Q9UKA9 531 aaKnown RBP16.84■□□□□ 0.29
CXCL12-204ENST00000395793 NPIPA1Q9UND3 350 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 ZNF835Q9Y2P0 537 aa16.84■□□□□ 0.29
CXCL12-204ENST00000395793 ABCA12Q86UK0 2595 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms