RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 DOCK3Q8IZD9 2030 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 NUP214P35658 2090 aaPredicted RBP11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 FAM240BA0A1B0GVZ2 78 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 AGAP5A6NIR3 686 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 AP3D1O14617 1153 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 TLL1O43897 1013 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 PRAMEF12O95522 483 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 PRNPP04156 253 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 C21orf33P30042 268 aaPredicted RBP11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 CLK3P49761 638 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 BNC1Q01954 994 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 FCHO2Q0JRZ9 810 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 C16orf62Q7Z3J2 963 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 NATD1Q8N6N6 113 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 SLC43A3Q8NBI5 491 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 FIBINQ8TAL6 211 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 SLC5A11Q8WWX8 675 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 ZNF514Q96K75 400 aaPredicted RBP11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 SLC35G5Q96KT7 338 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 SERHL2Q9H4I8 314 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 ACTL8Q9H568 366 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 ANKRA2Q9H9E1 313 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 SERHLQ9NQF3 203 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 MARCH5Q9NX47 278 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 PTGFRNQ9P2B2 879 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 ACSL6Q9UKU0 697 aa11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 SPIN1Q9Y657 262 aaPredicted RBP11.22□□□□□ -0.61
UBE2D3-209ENST00000394804 B4GALT3O60512 393 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 CST5P28325 142 aaPredicted RBP11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 ETV3P41162 512 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 CSNK1DP48730 415 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 TMEM115Q12893 351 aaPredicted RBP11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 KLHL22Q53GT1 634 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 KDM4DQ6B0I6 523 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 SERPINA13PQ6UXR4 307 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 TMIGD1Q6UXZ0 262 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 OR7G3Q8NG95 312 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 METTL2AQ96IZ6 378 aaKnown RBP11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 DMRTB1Q96MA1 342 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 ZNF300Q96RE9 604 aaPredicted RBP11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 SLC22A4Q9H015 551 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 SLCO3A1Q9UIG8 710 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 MGAT4BQ9UQ53 548 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 ERVK-11Q9UQG0 969 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 MIA3Q5JRA6 1907 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 HTR3EA5X5Y0 456 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 AGRPO00253 132 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 LEFTY2O00292 366 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 AQP9O43315 295 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 KCNK5O95279 499 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 CDK1P06493 297 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 DGKGP49619 791 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 CRISP1P54107 249 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 MADCAM1Q13477 382 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 AQP6Q13520 282 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 EIF4HQ15056 248 aaKnown RBP11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 OXA1LQ15070 435 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 NKG7Q16617 165 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 CRTC2Q53ET0 693 aaPredicted RBP11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 AGAP7PQ5VUJ5 663 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 XAF1Q6GPH4 301 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 CDK20Q8IZL9 346 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 RNF175Q8N4F7 328 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 TRAM1L1Q8N609 369 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 L3MBTL4Q8NA19 623 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 SUSD6Q92537 303 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 GLYATL1Q969I3 302 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 TMEM80Q96HE8 168 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 STOX2Q9P2F5 926 aaPredicted RBP11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 SATB2Q9UPW6 733 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 LOC285556D6RIA3 1793 aa11.21□□□□□ -0.61
UBE2D3-209ENST00000394804 DYRK3O43781 588 aa11.21□□□□□ -0.62
UBE2D3-209ENST00000394804 TPST2O60704 377 aa11.21□□□□□ -0.62
UBE2D3-209ENST00000394804 SULT1C4O75897 302 aa11.21□□□□□ -0.62
UBE2D3-209ENST00000394804 CCNYL3P0C7X3 344 aa11.21□□□□□ -0.62
UBE2D3-209ENST00000394804 RHCEP18577 417 aa11.21□□□□□ -0.62
UBE2D3-209ENST00000394804 KELP23276 732 aa11.21□□□□□ -0.62
UBE2D3-209ENST00000394804 MRPL58Q14197 206 aaKnown RBP11.21□□□□□ -0.62
UBE2D3-209ENST00000394804 IHHQ14623 411 aa11.21□□□□□ -0.62
UBE2D3-209ENST00000394804 CRB2Q5IJ48 1285 aa11.21□□□□□ -0.62
UBE2D3-209ENST00000394804 ZNF648Q5T619 568 aaPredicted RBP11.21□□□□□ -0.62
UBE2D3-209ENST00000394804 LCN1P1Q5VSP4 162 aa11.21□□□□□ -0.62
UBE2D3-209ENST00000394804 CACUL1Q86Y37 369 aa11.21□□□□□ -0.62
UBE2D3-209ENST00000394804 SMAD5Q99717 465 aaKnown RBP11.21□□□□□ -0.62
UBE2D3-209ENST00000394804 DUSP21Q9H596 190 aa11.21□□□□□ -0.62
UBE2D3-209ENST00000394804 BRF2Q9HAW0 419 aa11.21□□□□□ -0.62
UBE2D3-209ENST00000394804 ZNF232Q9UNY5 417 aa11.21□□□□□ -0.62
UBE2D3-209ENST00000394804 SH3D21A4FU49 640 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 TSC22D2O75157 780 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 SLC16A8O95907 504 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 C1GALT1C1LP0DN25 315 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 COX10Q12887 443 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 SF1Q15637 639 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 MICAQ29983 383 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 ZNF730Q6ZMV8 503 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 TMEM179BQ7Z7N9 219 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 YAF2Q8IY57 180 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 TCEANCQ8N8B7 351 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 KREMEN2Q8NCW0 462 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 OR9Q2Q8NGE9 314 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms