RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 DPM1O60762 260 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 LRG1P02750 347 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 CYP2A6P11509 494 aaPredicted RBP13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 XPAP23025 273 aaPredicted RBP13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 HOXD12P35452 270 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 NKX2-5P52952 324 aaPredicted RBP13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 TBPL1P62380 186 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 ZNF763Q0D2J5 394 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 PRSS53Q2L4Q9 553 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 MPEG1Q2M385 716 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 ZNF284Q2VY69 593 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 TMEM53Q6P2H8 277 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 RASGRP3Q8IV61 690 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 SLC44A2Q8IWA5 706 aaPredicted RBP13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 SORBS1Q9BX66 1292 aaKnown RBP13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 ANKHQ9HCJ1 492 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 ITM2BQ9Y287 266 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 ATP11BQ9Y2G3 1177 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 IFT52Q9Y366 437 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 SNPHO15079 494 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 NPC1O15118 1278 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 TGM5O43548 720 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 ATG13O75143 517 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 AP2A2O94973 939 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 GABRB1P18505 474 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 HOXD10P28358 340 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 TAS2R50P59544 299 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 ZNF33BQ06732 778 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 PTGES3Q15185 160 aaKnown RBP13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 TSTQ16762 297 aaKnown RBP13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 CAMKMTQ7Z624 323 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 TMC8Q8IU68 726 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 CACTIN-AS1Q8N1I8 211 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 DEPDC4Q8N2C3 294 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 C2orf73Q8N5S3 287 aaPredicted RBP13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 AQP11Q8NBQ7 271 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 KBTBD8Q8NFY9 601 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 OR56A3Q8NH54 315 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 ZNF480Q8WV37 535 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 SPNS1Q9H2V7 528 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 FKBP14Q9NWM8 211 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 CFAP20Q9Y6A4 193 aaKnown RBP13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 PCM1Q15154 2024 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 KLK1P06870 262 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 GSTT2P0CG29 244 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 GSTT2BP0CG30 244 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 DOC2BQ14184 412 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 OR52N2Q8NGI0 321 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 BTN2A2Q8WVV5 523 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 FOPNLQ96NB1 174 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 KCNS3Q9BQ31 491 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 BHLHE41Q9C0J9 482 aaPredicted RBP13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 ACER3Q9NUN7 267 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 HCFC1R1Q9NWW0 138 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 CCDC88CQ9P219 2028 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 TAF4O00268 1085 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 ZNF197O14709 1029 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 GADD45GO95257 159 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 CTSAP10619 480 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 TIMP2P16035 220 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 RPS26P62854 115 aaKnown RBP13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 TMEM115Q12893 351 aaPredicted RBP13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 ZNF181Q2M3W8 571 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 HENMT1Q5T8I9 393 aaKnown RBP13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 ATAD3BQ5T9A4 648 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 DESI1Q6ICB0 168 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 SPATC1Q76KD6 591 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 LACC1Q8IV20 430 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 CYP4Z2PQ8N1L4 340 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 TRAM1L1Q8N609 369 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 ZNF740Q8NDX6 193 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 SLC35B4Q969S0 331 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 IL4I1Q96RQ9 567 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 WRAP53Q9BUR4 548 aaKnown RBP13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 LINC00597Q9H2U6 94 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 C1GALT1Q9NS00 363 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 PCDHGA3Q9Y5H0 932 aa13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 MKI67P46013 3256 aaKnown RBP13.35□□□□□ -0.27
GAPVD1-205ENST00000394084 TRBC2A0A5B9 178 aa13.34□□□□□ -0.27
GAPVD1-205ENST00000394084 SLC5A10A0PJK1 596 aa13.34□□□□□ -0.27
GAPVD1-205ENST00000394084 H3BM21 787 aa13.34□□□□□ -0.27
GAPVD1-205ENST00000394084 KIAA0513O60268 411 aa13.34□□□□□ -0.27
GAPVD1-205ENST00000394084 COQ9O75208 318 aa13.34□□□□□ -0.27
GAPVD1-205ENST00000394084 ZNF30P17039 623 aa13.34□□□□□ -0.27
GAPVD1-205ENST00000394084 LEXMQ3ZCV2 418 aa13.34□□□□□ -0.27
GAPVD1-205ENST00000394084 BRAT1Q6PJG6 821 aa13.34□□□□□ -0.27
GAPVD1-205ENST00000394084 CFAP206Q8IYR0 622 aa13.34□□□□□ -0.27
GAPVD1-205ENST00000394084 C16orf78Q8WTQ4 265 aa13.34□□□□□ -0.27
GAPVD1-205ENST00000394084 GLYATL1Q969I3 302 aa13.34□□□□□ -0.27
GAPVD1-205ENST00000394084 AP2M1Q96CW1 435 aa13.34□□□□□ -0.27
GAPVD1-205ENST00000394084 VPS35Q96QK1 796 aa13.34□□□□□ -0.27
GAPVD1-205ENST00000394084 SP140LQ9H930 580 aa13.34□□□□□ -0.27
GAPVD1-205ENST00000394084 CPNE5Q9HCH3 593 aa13.34□□□□□ -0.27
GAPVD1-205ENST00000394084 C11orf16Q9NQ32 467 aa13.34□□□□□ -0.27
GAPVD1-205ENST00000394084 ATP6V1HQ9UI12 483 aa13.34□□□□□ -0.27
GAPVD1-205ENST00000394084 CCL16O15467 120 aa13.34□□□□□ -0.27
GAPVD1-205ENST00000394084 CCNB2O95067 398 aa13.34□□□□□ -0.27
GAPVD1-205ENST00000394084 GASTP01350 101 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms