RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 OR2A25A4D2G3 310 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 STK25O00506 426 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 CXCR6O00574 342 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 TIPRLO75663 272 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 FKBP9O95302 570 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 CSF2P04141 144 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 SERPIND1P05546 499 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 FCGR1AP12314 374 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 BMP2P12643 396 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 NME1P15531 152 aaKnown RBP10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 UGT2B7P16662 529 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 DDX5P17844 614 aaKnown RBP10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 HEPACAMQ14CZ8 416 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 MPEG1Q2M385 716 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 HMBOX1Q6NT76 420 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 TLDC1Q6P9B6 456 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 SLC36A4Q6YBV0 504 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 ZNF551Q7Z340 670 aaPredicted RBP10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 DEFB119Q8N690 84 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 OR4A15Q8NGL6 344 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 FAM110BQ8TC76 370 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 FIG4Q92562 907 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 POP5Q969H6 163 aaKnown RBP10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 MS4A6EQ96DS6 147 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 IER2Q9BTL4 223 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 SPATA9Q9BWV2 254 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 TPT1P8Q9HAU6 139 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 AGPAT4Q9NRZ5 378 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 ACTR10Q9NZ32 417 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 CNOT11Q9UKZ1 510 aaKnown RBP10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 KLK4Q9Y5K2 254 aa10.91□□□□□ -0.66
SMARCAL1-203ENST00000392128 OR6C74A6NCV1 312 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 ZW10O43264 779 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 TMPRSS11DO60235 418 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 RETP07949 1114 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 EFNA1P20827 205 aaPredicted RBP10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 TSFMP43897 325 aaKnown RBP10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 CXCL12P48061 93 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 AQP4P55087 323 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 HBA1P69905 142 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 GAB1Q13480 694 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 ANKFN1Q8N957 763 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 FAM47BQ8NA70 645 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 SRFBP1Q8NEF9 429 aaKnown RBP10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 OR2L5Q8NG80 312 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 ZFP90Q8TF47 636 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 ZDHHC1Q8WTX9 485 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 CIDECQ96AQ7 238 aaPredicted RBP10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 PPWD1Q96BP3 646 aaKnown RBP10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 KCNC2Q96PR1 638 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 TEFMQ96QE5 360 aaKnown RBP10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 SLC6A16Q9GZN6 736 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 PCDHGB4Q9UN71 923 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 KLHL20Q9Y2M5 609 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 SIT1Q9Y3P8 196 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 C2orf74A8MZ97 194 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 K7ESF4 209 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 TLR4O00206 839 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 AXIN1O15169 862 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 ABCB1P08183 1280 aaPredicted RBP10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 RPSAP08865 295 aaKnown RBP10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 POLR2CP19387 275 aaPredicted RBP10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 FASP25445 335 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 SSR2P43308 183 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 PLA2G16P53816 162 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 RELAQ04206 551 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 C1orf61Q13536 156 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 ELOCQ15369 112 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 SLC5A12Q1EHB4 618 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 PRSS53Q2L4Q9 553 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 TJAP1Q5JTD0 557 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 CPZQ66K79 652 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 ERICH5Q6P6B1 374 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 ABHD17CQ6PCB6 329 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 ZNF793Q6ZN11 406 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 TMEM26Q6ZUK4 368 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 TRIML2Q8N7C3 387 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 FAM46DQ8NEK8 389 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 OR10G6Q8NH81 332 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 C17orf62Q9BQA9 187 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 KLHL31Q9H511 634 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 SYNPO2LQ9H987 977 aa10.9□□□□□ -0.66
SMARCAL1-203ENST00000392128 TP53BP1Q12888 1972 aaPredicted RBP10.9□□□□□ -0.67
SMARCAL1-203ENST00000392128 GSAPA4D1B5 854 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 CREG1O75629 220 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 KCNK5O95279 499 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 C6orf47O95873 294 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 MAOBP27338 520 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 STXBP1P61764 594 aaKnown RBP10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 TOR1AIP1Q5JTV8 583 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 SPESP1Q6UW49 350 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 SFTPA2Q8IWL1 248 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 MMP21Q8N119 569 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 ZCCHC7Q8N3Z6 543 aaKnown RBP10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 ICA1LQ8NDH6 482 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 C1orf216Q8TAB5 229 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 NT5CQ8TCD5 201 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 FAM162AQ96A26 154 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 EME1Q96AY2 570 aa10.89□□□□□ -0.67
SMARCAL1-203ENST00000392128 HSPA12BQ96MM6 686 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms