RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 HNF4AP41235 474 aa16.69■□□□□ 0.26
RPUSD3-201ENST00000383820 STXBP1P61764 594 aaKnown RBP16.69■□□□□ 0.26
RPUSD3-201ENST00000383820 CCZ1BP86790 482 aa16.69■□□□□ 0.26
RPUSD3-201ENST00000383820 CCZ1P86791 482 aaPredicted RBP16.69■□□□□ 0.26
RPUSD3-201ENST00000383820 TESK1Q15569 626 aa16.69■□□□□ 0.26
RPUSD3-201ENST00000383820 PPP1R3AQ16821 1122 aa16.69■□□□□ 0.26
RPUSD3-201ENST00000383820 SPNS3Q6ZMD2 512 aa16.69■□□□□ 0.26
RPUSD3-201ENST00000383820 C3P1Q6ZMU1 363 aa16.69■□□□□ 0.26
RPUSD3-201ENST00000383820 MEX3BQ6ZN04 569 aaKnown RBP16.69■□□□□ 0.26
RPUSD3-201ENST00000383820 TMPRSS11BQ86T26 416 aa16.69■□□□□ 0.26
RPUSD3-201ENST00000383820 CYP4Z2PQ8N1L4 340 aa16.69■□□□□ 0.26
RPUSD3-201ENST00000383820 CA13Q8N1Q1 262 aa16.69■□□□□ 0.26
RPUSD3-201ENST00000383820 TMEM156Q8N614 296 aa16.69■□□□□ 0.26
RPUSD3-201ENST00000383820 CREB3L4Q8TEY5 395 aa16.69■□□□□ 0.26
RPUSD3-201ENST00000383820 ASB5Q8WWX0 329 aa16.69■□□□□ 0.26
RPUSD3-201ENST00000383820 NPLQ9BXD5 320 aaPredicted RBP16.69■□□□□ 0.26
RPUSD3-201ENST00000383820 KLHL31Q9H511 634 aa16.69■□□□□ 0.26
RPUSD3-201ENST00000383820 PLSCR2Q9NRY7 297 aa16.69■□□□□ 0.26
RPUSD3-201ENST00000383820 ADGRG4Q8IZF6 3080 aa16.69■□□□□ 0.26
RPUSD3-201ENST00000383820 C2CD3Q4AC94 2353 aa16.69■□□□□ 0.26
RPUSD3-201ENST00000383820 TRBV11-1A0A0K0K1C0 115 aa16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 A8MUA0 341 aa16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 TPOP07202 933 aa16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 GSTM2P28161 218 aa16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 KRTAP10-9P60411 292 aa16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 CDKL1Q00532 357 aa16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 RBBP5Q15291 538 aaKnown RBP16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 MSS51Q4VC12 460 aa16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 CMPK2Q5EBM0 449 aa16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 TOR1AIP1Q5JTV8 583 aa16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 ARHGAP11AQ6P4F7 1023 aa16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 CDH24Q86UP0 819 aa16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 CD163Q86VB7 1156 aa16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 SCUBE1Q8IWY4 988 aa16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 TTLQ8NG68 377 aa16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 GAL3ST3Q96A11 431 aa16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 VMP1Q96GC9 406 aa16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 RHBGQ9H310 441 aa16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 TP63Q9H3D4 680 aaPredicted RBP16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 PPANQ9NQ55 473 aaKnown RBP16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 ASIC3Q9UHC3 531 aa16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 SLC22A14Q9Y267 594 aa16.68■□□□□ 0.26
RPUSD3-201ENST00000383820 HIVEP1P15822 2718 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 CTAGE15A4D2H0 777 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 FOXO6A8MYZ6 492 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 C4orf51C9J302 202 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 HS6ST1O60243 411 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 BANF1O75531 89 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 ITGA10O75578 1167 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 MYO1DO94832 1006 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 ZNF37AP17032 561 aaPredicted RBP16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 HNMTP50135 292 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 HSD17B7P56937 341 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 CTAGE6Q86UF2 777 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 IGDCC3Q8IVU1 814 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 GPALPP1Q8IXQ4 340 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 NKAPQ8N5F7 415 aaKnown RBP16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 SLCO2A1Q92959 643 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 SEC16BQ96JE7 1060 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 PDLIM2Q96JY6 352 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 FAR2Q96K12 515 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 CCDC77Q9BR77 488 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 PLAC1Q9HBJ0 212 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 TIMMDC1Q9NPL8 285 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 SLC17A6Q9P2U8 582 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 FBXW2Q9UKT8 454 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 IKZF3Q9UKT9 509 aa16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 YARS2Q9Y2Z4 477 aaKnown RBP16.67■□□□□ 0.26
RPUSD3-201ENST00000383820 CELSR1Q9NYQ6 3014 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 A0A088AWK7 358 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 USP27XA6NNY8 438 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 CES2O00748 559 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 CLDN4O14493 209 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 H2AFYO75367 372 aaKnown RBP16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 ZFAND5O76080 213 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 TUBB4AP04350 444 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 IGFBP2P18065 325 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 GNAZP19086 355 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 ZNF10P21506 573 aaPredicted RBP16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 CHRNB4P30926 498 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 SSR4P51571 173 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 GPR143P51810 404 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 PGGT1BP53609 377 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 BTN3A2P78410 334 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 FRG1Q14331 258 aaKnown RBP16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 PAOXQ6QHF9 649 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 MDGA2Q7Z553 956 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 PDIK1LQ8N165 341 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 MARVELD2Q8N4S9 558 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 LILRB4Q8NHJ6 448 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 LRRC39Q96DD0 335 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 OSBPL9Q96SU4 736 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 PITHD1Q9GZP4 211 aaPredicted RBP16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 AICDAQ9GZX7 198 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 PRTFDC1Q9NRG1 225 aa16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 ZNF223Q9UK11 482 aaPredicted RBP16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 MRPS33Q9Y291 106 aaKnown RBP16.66■□□□□ 0.26
RPUSD3-201ENST00000383820 AKAP9Q99996 3911 aa16.65■□□□□ 0.26
RPUSD3-201ENST00000383820 CDC40O60508 579 aaKnown RBP eCLIP16.65■□□□□ 0.26
RPUSD3-201ENST00000383820 C1GALT1C1LP0DN25 315 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms