RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 PPTC7Q8NI37 304 aa14.39□□□□□ -0.11
CTNS-202ENST00000381870 EXOC2Q96KP1 924 aa14.39□□□□□ -0.11
CTNS-202ENST00000381870 FNIP2Q9P278 1114 aa14.39□□□□□ -0.11
CTNS-202ENST00000381870 YARS2Q9Y2Z4 477 aaKnown RBP14.39□□□□□ -0.11
CTNS-202ENST00000381870 RPS10-NUDT3A0A1W2PQS6 291 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 PRAMEF25A6NGN4 478 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 INMT-MINDY4F8WBC2 141 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 GTPBP1O00178 669 aaKnown RBP14.38□□□□□ -0.11
CTNS-202ENST00000381870 YY2O15391 372 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 HCN1O60741 890 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 IL1AP01583 271 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 RAF1P04049 648 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 AGFG1P52594 562 aaKnown RBP14.38□□□□□ -0.11
CTNS-202ENST00000381870 ZNF280AP59817 542 aaPredicted RBP14.38□□□□□ -0.11
CTNS-202ENST00000381870 CYP4F8P98187 520 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 SERINC3Q13530 473 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 FCN2Q15485 313 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 TAF1AQ15573 450 aaPredicted RBP14.38□□□□□ -0.11
CTNS-202ENST00000381870 C9orf131Q5VYM1 1079 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 GPR155Q7Z3F1 870 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 GPR65Q8IYL9 337 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 TMEM86AQ8N2M4 240 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 CPA6Q8N4T0 437 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 CLDN22Q8N7P3 220 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 KIAA1143Q96AT1 154 aaPredicted RBP14.38□□□□□ -0.11
CTNS-202ENST00000381870 FAM129BQ96TA1 746 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 PAAF1Q9BRP4 392 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 DNAJC27Q9NZQ0 273 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 TRPS1Q9UHF7 1281 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 DHRS7Q9Y394 339 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 A0A1W2PQH9 124 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 C2orf81A6NN90 581 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 RAMP2O60895 175 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 LGI1O95970 557 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 HLA-DQB1P01920 261 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 EBLN1P0CF75 366 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 FEN1P39748 380 aaKnown RBP14.38□□□□□ -0.11
CTNS-202ENST00000381870 RGRP47804 291 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 ALDH9A1P49189 494 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 CASP9P55211 416 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 UBE3AQ05086 875 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 VEZF1Q14119 521 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 ZMYND11Q15326 602 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 ANGPT1Q15389 498 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 CNIH2Q6PI25 160 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 ARSKQ6UWY0 536 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 HSDL2Q6YN16 418 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 WDR53Q7Z5U6 358 aaPredicted RBP14.38□□□□□ -0.11
CTNS-202ENST00000381870 BCDIN3DQ7Z5W3 292 aaKnown RBP14.38□□□□□ -0.11
CTNS-202ENST00000381870 DDX53Q86TM3 631 aaKnown RBP14.38□□□□□ -0.11
CTNS-202ENST00000381870 MICALL2Q8IY33 904 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 CHCHD4Q8N4Q1 142 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 OR11H4Q8NGC9 324 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 SELENOMQ8WWX9 145 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 APOLD1Q96LR9 279 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 PPP1R3EQ9H7J1 279 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 SLC25A19Q9HC21 320 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 ZFP64Q9NPA5 681 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 C11orf16Q9NQ32 467 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 FZD4Q9ULV1 537 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 SNX11Q9Y5W9 270 aa14.38□□□□□ -0.11
CTNS-202ENST00000381870 ISM1B1AKI9 464 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 SCN2BO60939 215 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 PRPS2P11908 318 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 CD9P21926 228 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 HMGCLP35914 325 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 WNT3P56703 355 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 ZNF284Q2VY69 593 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 PAN2Q504Q3 1202 aaKnown RBP14.37□□□□□ -0.11
CTNS-202ENST00000381870 GARNL3Q5VVW2 1013 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 LRRTM3Q86VH5 581 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 DENND1CQ8IV53 801 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 OR6C4Q8NGE1 309 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 PIH1D2Q8WWB5 315 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 COPS8Q99627 209 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 NTMT1Q9BV86 223 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 DPCDQ9BVM2 203 aaPredicted RBP14.37□□□□□ -0.11
CTNS-202ENST00000381870 ANKRA2Q9H9E1 313 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 TPT1P8Q9HAU6 139 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 TLR8Q9NR97 1041 aaKnown RBP14.37□□□□□ -0.11
CTNS-202ENST00000381870 FTSJ1Q9UET6 329 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.37□□□□□ -0.11
CTNS-202ENST00000381870 ZAR1LA6NP61 321 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 CHP2O43745 196 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 AKAP8O43823 692 aaKnown RBP14.37□□□□□ -0.11
CTNS-202ENST00000381870 HPGDSO60760 199 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 SERPINI2O75830 405 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 IGHA2P01877 340 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 TP53P04637 393 aaPredicted RBP14.37□□□□□ -0.11
CTNS-202ENST00000381870 TPOP07202 933 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 SMPD1P17405 629 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 ADCYAP1R1P41586 468 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 ATN1P54259 1190 aaPredicted RBP14.37□□□□□ -0.11
CTNS-202ENST00000381870 SRP54P61011 504 aaKnown RBP14.37□□□□□ -0.11
CTNS-202ENST00000381870 LRRC32Q14392 662 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 FGFBP1Q14512 234 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 CCDC85BQ15834 202 aaPredicted RBP14.37□□□□□ -0.11
CTNS-202ENST00000381870 UGT8Q16880 541 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 TAPT1Q6NXT6 567 aa14.37□□□□□ -0.11
CTNS-202ENST00000381870 FBXL22Q6P050 247 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms