RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 FRMD6Q96NE9 622 aa12.26□□□□□ -0.45
DNMT3A-204ENST00000380756 COMMD9Q9P000 198 aa12.26□□□□□ -0.45
DNMT3A-204ENST00000380756 CCDC59Q9P031 241 aaKnown RBP12.26□□□□□ -0.45
DNMT3A-204ENST00000380756 ENPP5Q9UJA9 477 aa12.26□□□□□ -0.45
DNMT3A-204ENST00000380756 ERVW-1Q9UQF0 538 aa12.26□□□□□ -0.45
DNMT3A-204ENST00000380756 EVPLQ92817 2033 aa12.26□□□□□ -0.45
DNMT3A-204ENST00000380756 FAM170BA6NMN3 283 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 UBFD1O14562 309 aaKnown RBP12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 KIAA0513O60268 411 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 ACP5P13686 325 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 ETFAP13804 333 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 CPN2P22792 545 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 ARRB2P32121 409 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 LASP1Q14847 261 aaKnown RBP12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 RUNDC3AQ59EK9 446 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 FOXB2Q5VYV0 432 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 SYCE2Q6PIF2 218 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 ASB18Q6ZVZ8 466 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 ADGRG2Q8IZP9 1017 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 C11orf84Q9BUA3 381 aaPredicted RBP12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 TNFRSF10DQ9UBN6 386 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 SLCO3A1Q9UIG8 710 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 PAPPAQ13219 1627 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 CHURC1-FNTBB4DL54 471 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 DLGAP1O14490 977 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 SLC10A3P09131 477 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 ETV3P41162 512 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 RGRP47804 291 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 GMFBP60983 142 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 GINS1Q14691 196 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 SPHARQ15513 63 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 MSANTD1Q6ZTZ1 278 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 FAM129CQ86XR2 697 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 WDR48Q8TAF3 677 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 GTF2H4Q92759 462 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 MAL2Q969L2 176 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 VMP1Q96GC9 406 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 IGSF21Q96ID5 467 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 SPATA9Q9BWV2 254 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 MRPS30Q9NP92 439 aaKnown RBP12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 TDP1Q9NUW8 608 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 GPRC5BQ9NZH0 403 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 INTS6Q9UL03 887 aaKnown RBP12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 GABRQQ9UN88 632 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 USP22Q9UPT9 525 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 PCDHGB5Q9Y5G0 923 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 PCDHA9Q9Y5H5 950 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 COL16A1Q07092 1604 aaPredicted RBP12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 NOS1APO75052 506 aaPredicted RBP12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 SOD2P04179 222 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 FAUP35544 74 aaKnown RBP12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 DCDC1P59894 354 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 LY6G5CQ5SRR4 150 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 SLC5A8Q8N695 610 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 GLYATL1Q969I3 302 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 SH3YL1Q96HL8 342 aaPredicted RBP12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 GPR78Q96P69 363 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 GINS4Q9BRT9 223 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 TSSK6Q9BXA6 273 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 SMG9Q9H0W8 520 aaKnown RBP12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 C11orf49Q9H6J7 331 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 GPR83Q9NYM4 423 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 CD300AQ9UGN4 299 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 UTS2RQ9UKP6 389 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 RFPL2O75678 378 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 PRAMEF12O95522 483 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 ALPLP05186 524 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 C1GALT1C1LP0DN25 315 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 GJA5P36382 358 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 HTRA3P83110 453 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 ARL9Q6T311 187 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 SPRED1Q7Z699 444 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 COX18Q8N8Q8 333 aa12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 RSPH9Q9H1X1 276 aaPredicted RBP12.25□□□□□ -0.45
DNMT3A-204ENST00000380756 TNRC6CQ9HCJ0 1690 aaKnown RBP12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 CROCCQ5TZA2 2017 aa12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 GJB3O75712 270 aa12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 RPS3P23396 243 aaKnown RBP eCLIP12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 GADD45AP24522 165 aa12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 CRISP1P54107 249 aa12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 TLE2Q04725 743 aa12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 HNRNPA0Q13151 305 aaKnown RBP12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 LIPKQ5VXJ0 399 aa12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 APCDD1Q8J025 514 aa12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 OR8J1Q8NGP2 316 aa12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 ZNF296Q8WUU4 475 aaPredicted RBP12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 SLC39A13Q96H72 371 aa12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 TMED9Q9BVK6 235 aa12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 SLC12A9Q9BXP2 914 aa12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 ACSL6Q9UKU0 697 aa12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 WNT6Q9Y6F9 365 aa12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 LEFTY2O00292 366 aa12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 CAPN5O15484 640 aaPredicted RBP12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 SDC1P18827 310 aa12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 ARNTP27540 789 aa12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 DCKP27707 260 aa12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 ACSL1P33121 698 aa12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 ALDH3B2P48448 385 aa12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 ST3GAL3Q11203 375 aa12.24□□□□□ -0.45
DNMT3A-204ENST00000380756 ZNF155Q12901 538 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms