RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 IFNB1P01574 187 aa16.08■□□□□ 0.16
HMGN1-203ENST00000380748 F7P08709 466 aaPredicted RBP16.08■□□□□ 0.16
HMGN1-203ENST00000380748 ZNF888P0CJ79 500 aaPredicted RBP16.08■□□□□ 0.16
HMGN1-203ENST00000380748 CDH1P12830 882 aa16.08■□□□□ 0.16
HMGN1-203ENST00000380748 ALOX12P18054 663 aa16.08■□□□□ 0.16
HMGN1-203ENST00000380748 MAN2A2P49641 1150 aa16.08■□□□□ 0.16
HMGN1-203ENST00000380748 ASCL1P50553 236 aa16.08■□□□□ 0.16
HMGN1-203ENST00000380748 ADARP55265 1226 aaKnown RBP16.08■□□□□ 0.16
HMGN1-203ENST00000380748 XKR6Q5GH73 641 aa16.08■□□□□ 0.16
HMGN1-203ENST00000380748 WLSQ5T9L3 541 aa16.08■□□□□ 0.16
HMGN1-203ENST00000380748 NDUFAF5Q5TEU4 345 aa16.08■□□□□ 0.16
HMGN1-203ENST00000380748 SHEQ5VZ18 495 aa16.08■□□□□ 0.16
HMGN1-203ENST00000380748 SEM1Q6ZVN7 128 aa16.08■□□□□ 0.16
HMGN1-203ENST00000380748 SDCCAG8Q86SQ7 713 aaPredicted RBP16.08■□□□□ 0.16
HMGN1-203ENST00000380748 C17orf64Q86WR6 236 aa16.08■□□□□ 0.16
HMGN1-203ENST00000380748 SREK1Q8WXA9 508 aaKnown RBP16.08■□□□□ 0.16
HMGN1-203ENST00000380748 RNASE6Q93091 150 aaKnown RBP16.08■□□□□ 0.16
HMGN1-203ENST00000380748 MFSD3Q96ES6 412 aa16.08■□□□□ 0.16
HMGN1-203ENST00000380748 FAM129AQ9BZQ8 928 aa16.08■□□□□ 0.16
HMGN1-203ENST00000380748 BEX4Q9NWD9 120 aaPredicted RBP16.08■□□□□ 0.16
HMGN1-203ENST00000380748 TRMT1Q9NXH9 659 aaKnown RBP16.08■□□□□ 0.16
HMGN1-203ENST00000380748 ZFATQ9P243 1243 aa16.08■□□□□ 0.16
HMGN1-203ENST00000380748 ATP6AP2A0A1C7CYW4 349 aa16.07■□□□□ 0.16
HMGN1-203ENST00000380748 INAFM1C9JVW0 142 aa16.07■□□□□ 0.16
HMGN1-203ENST00000380748 H7C1Q1 480 aa16.07■□□□□ 0.16
HMGN1-203ENST00000380748 ATP6AP2O75787 350 aa16.07■□□□□ 0.16
HMGN1-203ENST00000380748 ETS1P14921 441 aa16.07■□□□□ 0.16
HMGN1-203ENST00000380748 ENDOUP21128 410 aaKnown RBP16.07■□□□□ 0.16
HMGN1-203ENST00000380748 BMP5P22003 454 aa16.07■□□□□ 0.16
HMGN1-203ENST00000380748 CYHR1Q6ZMK1 362 aa16.07■□□□□ 0.16
HMGN1-203ENST00000380748 GK5Q6ZS86 529 aa16.07■□□□□ 0.16
HMGN1-203ENST00000380748 CXorf67Q86X51 503 aaPredicted RBP16.07■□□□□ 0.16
HMGN1-203ENST00000380748 GPALPP1Q8IXQ4 340 aa16.07■□□□□ 0.16
HMGN1-203ENST00000380748 NAXEQ8NCW5 288 aa16.07■□□□□ 0.16
HMGN1-203ENST00000380748 ASB15Q8WXK1 588 aa16.07■□□□□ 0.16
HMGN1-203ENST00000380748 NCLNQ969V3 563 aa16.07■□□□□ 0.16
HMGN1-203ENST00000380748 SARAFQ96BY9 339 aa16.07■□□□□ 0.16
HMGN1-203ENST00000380748 VMP1Q96GC9 406 aa16.07■□□□□ 0.16
HMGN1-203ENST00000380748 PDLIM2Q96JY6 352 aa16.07■□□□□ 0.16
HMGN1-203ENST00000380748 FAM173AQ9BQD7 235 aa16.07■□□□□ 0.16
HMGN1-203ENST00000380748 RHBGQ9H310 441 aa16.07■□□□□ 0.16
HMGN1-203ENST00000380748 IL1RL2Q9HB29 575 aa16.07■□□□□ 0.16
HMGN1-203ENST00000380748 SPRR3Q9UBC9 169 aa16.07■□□□□ 0.16
HMGN1-203ENST00000380748 ZBTB14O43829 449 aa16.06■□□□□ 0.16
HMGN1-203ENST00000380748 SUSD5O60279 629 aa16.06■□□□□ 0.16
HMGN1-203ENST00000380748 SERPIND1P05546 499 aa16.06■□□□□ 0.16
HMGN1-203ENST00000380748 MPC1LP0DKB6 136 aa16.06■□□□□ 0.16
HMGN1-203ENST00000380748 EPXP11678 715 aa16.06■□□□□ 0.16
HMGN1-203ENST00000380748 PPP2R1BP30154 601 aa16.06■□□□□ 0.16
HMGN1-203ENST00000380748 GRK3P35626 688 aa16.06■□□□□ 0.16
HMGN1-203ENST00000380748 SOX3P41225 446 aa16.06■□□□□ 0.16
HMGN1-203ENST00000380748 ZNF750Q32MQ0 723 aa16.06■□□□□ 0.16
HMGN1-203ENST00000380748 TTLL9Q3SXZ7 439 aa16.06■□□□□ 0.16
HMGN1-203ENST00000380748 FBXL19-AS1Q494R0 122 aa16.06■□□□□ 0.16
HMGN1-203ENST00000380748 MBOAT1Q6ZNC8 495 aa16.06■□□□□ 0.16
HMGN1-203ENST00000380748 UBE2R2Q712K3 238 aaPredicted RBP16.06■□□□□ 0.16
HMGN1-203ENST00000380748 ARMC2Q8NEN0 867 aa16.06■□□□□ 0.16
HMGN1-203ENST00000380748 ALKBH8Q96BT7 664 aaKnown RBP16.06■□□□□ 0.16
HMGN1-203ENST00000380748 TCF12Q99081 682 aa16.06■□□□□ 0.16
HMGN1-203ENST00000380748 PCBD2Q9H0N5 130 aa16.06■□□□□ 0.16
HMGN1-203ENST00000380748 LDAHQ9H6V9 325 aa16.06■□□□□ 0.16
HMGN1-203ENST00000380748 PNO1Q9NRX1 252 aaKnown RBP16.06■□□□□ 0.16
HMGN1-203ENST00000380748 MED16Q9Y2X0 877 aa16.06■□□□□ 0.16
HMGN1-203ENST00000380748 ARID1AO14497 2285 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 TUBAL3A6NHL2 446 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 HSPB2A8KAH6 182 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 PSMD12O00232 456 aaPredicted RBP16.05■□□□□ 0.16
HMGN1-203ENST00000380748 DVL2O14641 736 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 SMAD7O15105 426 aaKnown RBP16.05■□□□□ 0.16
HMGN1-203ENST00000380748 OR1F1O43749 312 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 RNH1P13489 461 aaKnown RBP16.05■□□□□ 0.16
HMGN1-203ENST00000380748 GABRA1P14867 456 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 CNR1P21554 472 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 STIP1P31948 543 aaKnown RBP16.05■□□□□ 0.16
HMGN1-203ENST00000380748 DNASE1L1P49184 302 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 GPR143P51810 404 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 NAP1L1P55209 391 aaKnown RBP16.05■□□□□ 0.16
HMGN1-203ENST00000380748 WNT3P56703 355 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 SKP1P63208 163 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 FOXO1Q12778 655 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 POU4F3Q15319 338 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 OASLQ15646 514 aaKnown RBP16.05■□□□□ 0.16
HMGN1-203ENST00000380748 HSPB2Q16082 182 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 Q5PR19 223 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 CENPUQ71F23 418 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 PIWIL4Q7Z3Z4 852 aaKnown RBP16.05■□□□□ 0.16
HMGN1-203ENST00000380748 SLC13A5Q86YT5 568 aaPredicted RBP16.05■□□□□ 0.16
HMGN1-203ENST00000380748 CNGA4Q8IV77 575 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 LINC01560Q8TB33 94 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 CAPZA3Q96KX2 299 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 RASL10BQ96S79 203 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 CCDC77Q9BR77 488 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 AARSD1Q9BTE6 412 aaKnown RBP16.05■□□□□ 0.16
HMGN1-203ENST00000380748 IL22Q9GZX6 179 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 EXO5Q9H790 373 aa16.05■□□□□ 0.16
HMGN1-203ENST00000380748 PACSIN2Q9UNF0 486 aaPredicted RBP16.05■□□□□ 0.16
HMGN1-203ENST00000380748 PPIEQ9UNP9 301 aaKnown RBP16.05■□□□□ 0.16
HMGN1-203ENST00000380748 TRGV5A0A0B4J1U4 118 aa16.04■□□□□ 0.16
HMGN1-203ENST00000380748 A0A1W2PPR1 153 aa16.04■□□□□ 0.16
HMGN1-203ENST00000380748 GRID2IPA4D2P6 1211 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms