RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 PSMG3-AS1Q96PY0 264 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 RBCK1Q9BYM8 510 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 TRIM55Q9BYV6 548 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 PITHD1Q9GZP4 211 aaPredicted RBP8.74□□□□□ -1.01
HMGN1-202ENST00000380747 ING2Q9H160 280 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 EPN3Q9H201 632 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 KLHL31Q9H511 634 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 NT5DC2Q9H857 520 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 PPCSQ9HAB8 311 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 SEMA3GQ9NS98 782 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 P4HTMQ9NXG6 502 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 TMEM216Q9P0N5 145 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 ANAPC2Q9UJX6 822 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 C3orf18Q9UK00 162 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 SLC22A7Q9Y694 548 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 CELSR2Q9HCU4 2923 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 ABCA12Q86UK0 2595 aa8.74□□□□□ -1.01
HMGN1-202ENST00000380747 PCM1Q15154 2024 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 IGLV3-12A0A075B6K2 115 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 A6NL46 340 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 MKRN2OSH3BPM6 223 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 E2F3O00716 465 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 GALR3O60755 368 aaPredicted RBP8.73□□□□□ -1.01
HMGN1-202ENST00000380747 JRKO75564 520 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 SERPINA6P08185 405 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 SPTBP11277 2137 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 TAC1P20366 129 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 GSTM2P28161 218 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 XCR1P46094 333 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 PIK3CGP48736 1102 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 RRADP55042 308 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 SKP1P63208 163 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 OLR1P78380 273 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 BTN3A2P78410 334 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 HYAL2Q12891 473 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 DDX39BQ13838 428 aaKnown RBP8.73□□□□□ -1.01
HMGN1-202ENST00000380747 MINDY4Q4G0A6 757 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 FAAH2Q6GMR7 532 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 ADNP2Q6IQ32 1131 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 MED27Q6P2C8 311 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 MED25Q71SY5 747 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 APLFQ8IW19 511 aaPredicted RBP8.73□□□□□ -1.01
HMGN1-202ENST00000380747 ZC3H7AQ8IWR0 971 aaKnown RBP8.73□□□□□ -1.01
HMGN1-202ENST00000380747 SHISA5Q8N114 240 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 CNPY4Q8N129 248 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 AFAP1L2Q8N4X5 818 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 FAM26EQ8N5C1 309 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 OR5T3Q8NGG3 340 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 OR51Q1Q8NH59 317 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 C9orf43Q8TAL5 461 aaPredicted RBP8.73□□□□□ -1.01
HMGN1-202ENST00000380747 CAVIN3Q969G5 261 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 UBE2E3Q969T4 207 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 ATP6V1E2Q96A05 226 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 ABHD17AQ96GS6 310 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 PEX11GQ96HA9 241 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 FAR2Q96K12 515 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 FER1L6-AS2Q96M78 137 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 IPPKQ9H8X2 491 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 ACTR8Q9H981 624 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 ZNF71Q9NQZ8 489 aaPredicted RBP8.73□□□□□ -1.01
HMGN1-202ENST00000380747 DCDC2Q9UHG0 476 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 FBXL4Q9UKA2 621 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 MKL2Q9ULH7 1088 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 ZNF490Q9ULM2 529 aaPredicted RBP8.73□□□□□ -1.01
HMGN1-202ENST00000380747 HS3ST3B1Q9Y662 390 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 CRYBG3Q68DQ2 2970 aa8.73□□□□□ -1.01
HMGN1-202ENST00000380747 A0A0G2JN53 185 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 A8MT66 165 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 IDSB3KWA1 339 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 STX16-NPEPL1H3BU86 382 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 MASP2O00187 686 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 STX16O14662 325 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 ERI3O43414 337 aaKnown RBP8.72□□□□□ -1.01
HMGN1-202ENST00000380747 CHST10O43529 356 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 DNAJB6O75190 326 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 CDH16O75309 829 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 GLRA3O75311 464 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 ALOX12BO75342 701 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 SH3BGRLO75368 114 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 CLEC3AO75596 197 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 WFS1O76024 890 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 BMP10O95393 424 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 GSTA1P08263 222 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 NUDT17P0C025 328 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 SBK3P0C264 359 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 HNRNPH1P31943 449 aaKnown RBP8.72□□□□□ -1.01
HMGN1-202ENST00000380747 CASP2P42575 452 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 PLA2G16P53816 162 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 TUBB8Q3ZCM7 444 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 DCAF10Q5QP82 559 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 GRHL2Q6ISB3 625 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 NIPAL1Q6NVV3 410 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 TRIM40Q6P9F5 258 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 KIRREL2Q6UWL6 708 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 VN1R5Q7Z5H4 357 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 LCA5Q86VQ0 697 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 C4orf33Q8N1A6 199 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 TMEM102Q8N9M5 508 aaPredicted RBP8.72□□□□□ -1.01
HMGN1-202ENST00000380747 CLEC1AQ8NC01 280 aa8.72□□□□□ -1.01
HMGN1-202ENST00000380747 PPP4R1Q8TF05 950 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms