RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 NPIPB8E9PQR5 432 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 SLCO1B7G3V0H7 640 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 H0YIG0 161 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 LSM1O15116 133 aaKnown RBP17.8■□□□□ 0.44
SMN2-202ENST00000380742 RDH16O75452 317 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 EEDO75530 441 aaKnown RBP17.8■□□□□ 0.44
SMN2-202ENST00000380742 RSL1D1O76021 490 aaKnown RBP17.8■□□□□ 0.44
SMN2-202ENST00000380742 VIMP08670 466 aaKnown RBP17.8■□□□□ 0.44
SMN2-202ENST00000380742 ATXN8OSP0DMR3 200 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 ATP5A1P25705 553 aaKnown RBP17.8■□□□□ 0.44
SMN2-202ENST00000380742 CERS1P27544 350 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 SSR2P43308 183 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 AVPR1BP47901 424 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 HK2P52789 917 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 OLR1P78380 273 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 SHC2P98077 582 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 ABHD18Q0P651 414 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 AP5B1Q2VPB7 878 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 SPDYAQ5MJ70 313 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 PRMT9Q6P2P2 845 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 C6orf15Q6UXA7 325 aaPredicted RBP17.8■□□□□ 0.44
SMN2-202ENST00000380742 ZNF517Q6ZMY9 492 aaPredicted RBP17.8■□□□□ 0.44
SMN2-202ENST00000380742 LRRC34Q8IZ02 419 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 C1orf52Q8N6N3 182 aaKnown RBP17.8■□□□□ 0.44
SMN2-202ENST00000380742 OR5T3Q8NGG3 340 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 MEAF6Q9HAF1 191 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 ZNF304Q9HCX3 659 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 FGFR1OP2Q9NVK5 253 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 AHSPQ9NZD4 102 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 ACSL6Q9UKU0 697 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 CDC14AQ9UNH5 594 aa17.8■□□□□ 0.44
SMN2-202ENST00000380742 SDHDO14521 159 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 SCELO95171 688 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 ONECUT2O95948 504 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 HIST1H1TP22492 207 aaPredicted RBP17.79■□□□□ 0.44
SMN2-202ENST00000380742 CD82P27701 267 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 TSFMP43897 325 aaKnown RBP17.79■□□□□ 0.44
SMN2-202ENST00000380742 MTTPP55157 894 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 RAE1P78406 368 aaKnown RBP17.79■□□□□ 0.44
SMN2-202ENST00000380742 DCDP81605 110 aaKnown RBP17.79■□□□□ 0.44
SMN2-202ENST00000380742 MAT1AQ00266 395 aaKnown RBP17.79■□□□□ 0.44
SMN2-202ENST00000380742 RUNX2Q13950 521 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 SLC9A5Q14940 896 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 KIAA0040Q15053 153 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 NR6A1Q15406 480 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 SYT16Q17RD7 645 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 NKAIN1Q4KMZ8 207 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 FAM199XQ6PEV8 388 aaPredicted RBP17.79■□□□□ 0.44
SMN2-202ENST00000380742 COX15Q7KZN9 410 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 COMMD6Q7Z4G1 85 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 ACOT4Q8N9L9 421 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 C11orf24Q96F05 449 aaPredicted RBP17.79■□□□□ 0.44
SMN2-202ENST00000380742 ZNF578Q96N58 590 aaPredicted RBP17.79■□□□□ 0.44
SMN2-202ENST00000380742 SERINC2Q96SA4 455 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 DDX31Q9H8H2 851 aaKnown RBP17.79■□□□□ 0.44
SMN2-202ENST00000380742 COPS7BQ9H9Q2 264 aaPredicted RBP17.79■□□□□ 0.44
SMN2-202ENST00000380742 PFDN4Q9NQP4 134 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 C1orf109Q9NX04 203 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 ASPMQ8IZT6 3477 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 TRPC5OSA6NMA1 111 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.79■□□□□ 0.44
SMN2-202ENST00000380742 STMND1H3BQB6 276 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 PEX11AO75192 247 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 SEC22BO75396 215 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 GBAP04062 536 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 KLK1P06870 262 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 KLK3P07288 261 aaPredicted RBP17.79■□□□□ 0.44
SMN2-202ENST00000380742 ALOX15P16050 662 aaPredicted RBP17.79■□□□□ 0.44
SMN2-202ENST00000380742 FBLP22087 321 aaKnown RBP17.79■□□□□ 0.44
SMN2-202ENST00000380742 TPP2P29144 1249 aaPredicted RBP17.79■□□□□ 0.44
SMN2-202ENST00000380742 LSP1P33241 339 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 GNGT1P63211 74 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 ACSM2AQ08AH3 577 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 DSG2Q14126 1118 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 MAP7Q14244 749 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 TBC1D25Q3MII6 688 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 GALNTL6Q49A17 601 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 RFTN2Q52LD8 501 aaPredicted RBP17.79■□□□□ 0.44
SMN2-202ENST00000380742 SPIN4Q56A73 249 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 ACSM2BQ68CK6 577 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 CGB2Q6NT52 195 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 NIPAL1Q6NVV3 410 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 NUDT13Q86X67 352 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 MR1Q95460 341 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 COL26A1Q96A83 441 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 TUBGCP3Q96CW5 907 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 THOC1Q96FV9 657 aaKnown RBP17.79■□□□□ 0.44
SMN2-202ENST00000380742 DPH2Q9BQC3 489 aaPredicted RBP17.79■□□□□ 0.44
SMN2-202ENST00000380742 ROGDIQ9GZN7 287 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 CHST8Q9H2A9 424 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 WDR55Q9H6Y2 383 aaPredicted RBP17.79■□□□□ 0.44
SMN2-202ENST00000380742 AKTIPQ9H8T0 292 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 LRTM1Q9HBL6 345 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 RIC8BQ9NVN3 520 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 SIRT5Q9NXA8 310 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 HCN3Q9P1Z3 774 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 ANGPTL2Q9UKU9 493 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 PADI1Q9ULC6 663 aa17.79■□□□□ 0.44
SMN2-202ENST00000380742 FREM2Q5SZK8 3169 aa17.78■□□□□ 0.44
SMN2-202ENST00000380742 A0A088AWK7 358 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms