RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 SLC44A3Q8N4M1 653 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 ATPAF2Q8N5M1 289 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 RDM1Q8NG50 284 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 GPR150Q8NGU9 434 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 OR5K1Q8NHB7 308 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 TCEAL3Q969E4 200 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 C3orf30Q96M34 536 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 LGMNQ99538 433 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 GPR22Q99680 433 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 EGFL8Q99944 293 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 DPCDQ9BVM2 203 aaPredicted RBP6.33□□□□□ -1.4
RIPK1-202ENST00000380409 SEMA6CQ9H3T2 930 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 PPP1R3EQ9H7J1 279 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 GOLGA2P5Q9HBQ8 144 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 MIOXQ9UGB7 285 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 PLCL2Q9UPR0 1127 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 MAB21L2Q9Y586 359 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 DMRT1Q9Y5R6 373 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 ZCWPW2A0A1B0GU75 182 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 E9PAM4 449 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 UBFD1O14562 309 aaKnown RBP6.33□□□□□ -1.4
RIPK1-202ENST00000380409 TERTO14746 1132 aaKnown RBP6.33□□□□□ -1.4
RIPK1-202ENST00000380409 TSPAN6O43657 245 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 IRF1P10914 325 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 PRKAR2AP13861 404 aaKnown RBP6.33□□□□□ -1.4
RIPK1-202ENST00000380409 FOLR2P14207 255 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 TSPAN8P19075 237 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 DDX6P26196 483 aaKnown RBP eCLIP6.33□□□□□ -1.4
RIPK1-202ENST00000380409 BTCP35070 178 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 SOX6P35712 828 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 AKR1D1P51857 326 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 BEX3Q00994 111 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 FGFBP1Q14512 234 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 ZNF235Q14590 738 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 TMEM44Q2T9K0 475 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 SLC16A13Q7RTY0 426 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 PIWIL4Q7Z3Z4 852 aaKnown RBP6.33□□□□□ -1.4
RIPK1-202ENST00000380409 NANOGP1Q8N7R0 232 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 OR1S1Q8NH92 325 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 ZNF516Q92618 1163 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 CERS2Q96G23 380 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 ART5Q96L15 291 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 SLC38A2Q96QD8 506 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 SEPT5Q99719 369 aaPredicted RBP6.33□□□□□ -1.4
RIPK1-202ENST00000380409 TRMOQ9BU70 441 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 SORBS1Q9BX66 1292 aaKnown RBP6.33□□□□□ -1.4
RIPK1-202ENST00000380409 ANKRD19PQ9H560 264 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 CAB39LQ9H9S4 337 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 RNF122Q9H9V4 155 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 B3GAT2Q9NPZ5 323 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 VNN3Q9NY84 501 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 ZNF624Q9P2J8 865 aaPredicted RBP6.33□□□□□ -1.4
RIPK1-202ENST00000380409 MYEF2Q9P2K5 600 aaKnown RBP6.33□□□□□ -1.4
RIPK1-202ENST00000380409 NDRG2Q9UN36 371 aaKnown RBP6.33□□□□□ -1.4
RIPK1-202ENST00000380409 SLC6A5Q9Y345 797 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 ZNF106Q9H2Y7 1883 aaKnown RBP6.33□□□□□ -1.4
RIPK1-202ENST00000380409 C5orf52A6NGY3 159 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 GTPBP1O00178 669 aaKnown RBP6.33□□□□□ -1.4
RIPK1-202ENST00000380409 CLDN5O00501 218 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 ACKR2O00590 384 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 TRUB2O95900 331 aaKnown RBP6.33□□□□□ -1.4
RIPK1-202ENST00000380409 S1PR4O95977 384 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 CSF2P04141 144 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 CKMT1AP12532 417 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 GABRB1P18505 474 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 PAMP19021 973 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 ATP5A1P25705 553 aaKnown RBP6.33□□□□□ -1.4
RIPK1-202ENST00000380409 ICAM3P32942 547 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 RPS19P39019 145 aaKnown RBP6.33□□□□□ -1.4
RIPK1-202ENST00000380409 PBX3P40426 434 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 TAF6P49848 677 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 TKTL1P51854 596 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 AP1S1P61966 158 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 RNF4P78317 190 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 PLA1AQ53H76 456 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 ZNF628Q5EBL2 1059 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 DNAJB7Q7Z6W7 309 aaPredicted RBP6.33□□□□□ -1.4
RIPK1-202ENST00000380409 ZNF655Q8N720 491 aaPredicted RBP6.33□□□□□ -1.4
RIPK1-202ENST00000380409 REPS2Q8NFH8 660 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 MRPL38Q96DV4 380 aaKnown RBP6.33□□□□□ -1.4
RIPK1-202ENST00000380409 TMEM41AQ96HV5 264 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 GLOD4Q9HC38 313 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 ADAM30Q9UKF2 790 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 PADI2Q9Y2J8 665 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 ZNF236Q9UL36 1845 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 TRIP11Q15643 1979 aa6.33□□□□□ -1.4
RIPK1-202ENST00000380409 SLC28A1O00337 649 aa6.32□□□□□ -1.4
RIPK1-202ENST00000380409 TSC22D2O75157 780 aa6.32□□□□□ -1.4
RIPK1-202ENST00000380409 IFNGP01579 166 aa6.32□□□□□ -1.4
RIPK1-202ENST00000380409 GP1BAP07359 652 aa6.32□□□□□ -1.4
RIPK1-202ENST00000380409 RPL6Q02878 288 aaKnown RBP6.32□□□□□ -1.4
RIPK1-202ENST00000380409 FCN2Q15485 313 aa6.32□□□□□ -1.4
RIPK1-202ENST00000380409 VPS26BQ4G0F5 336 aa6.32□□□□□ -1.4
RIPK1-202ENST00000380409 AARDQ4LEZ3 155 aa6.32□□□□□ -1.4
RIPK1-202ENST00000380409 HECTD3Q5T447 861 aa6.32□□□□□ -1.4
RIPK1-202ENST00000380409 SLC39A4Q6P5W5 647 aa6.32□□□□□ -1.4
RIPK1-202ENST00000380409 RBMS3Q6XE24 437 aaKnown RBP6.32□□□□□ -1.4
RIPK1-202ENST00000380409 ENTHD1Q8IYW4 607 aa6.32□□□□□ -1.4
RIPK1-202ENST00000380409 FSTL5Q8N475 847 aaPredicted RBP6.32□□□□□ -1.4
RIPK1-202ENST00000380409 DPP10Q8N608 796 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms